Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 RNA5SP188-201ENST00000362916 129 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 SNORD94-201ENST00000386037 137 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 RNA5SP155-201ENST00000411154 129 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3AP84243 AL139415.1-201ENST00000424862 352 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3AP84243 AL445991.1-201ENST00000450381 475 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3AP84243 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3AP84243 SNORA58-201ENST00000505219 137 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3AP84243 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3AP84243 AC008429.2-201ENST00000523057 864 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 IGLV3-6-201ENST00000523937 250 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3AP84243 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.88□□□□□ -1.47
H3F3AP84243 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3AP84243 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.88□□□□□ -1.47
H3F3AP84243 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3AP84243 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 MIR4301-201ENST00000577203 66 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3AP84243 AC012175.1-201ENST00000603755 531 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 SNORD96A-201ENST00000606577 79 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 AC135068.11-201ENST00000636378 921 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.88□□□□□ -1.47
H3F3AP84243 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3AP84243 AC010624.4-201ENST00000597606 1351 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3AP84243 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 AC067942.1-201ENST00000488045 1493 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
H3F3AP84243 AP000641.1-201ENST00000531988 1639 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3AP84243 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3AP84243 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 AC092646.2-201ENST00000431242 2095 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
H3F3AP84243 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.87□□□□□ -1.47
H3F3AP84243 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.87□□□□□ -1.47
H3F3AP84243 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.87□□□□□ -1.47
H3F3AP84243 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.87□□□□□ -1.47
H3F3AP84243 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 U3.52-201ENST00000384034 216 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 RANP6-201ENST00000413691 644 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.87□□□□□ -1.47
H3F3AP84243 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.87□□□□□ -1.47
H3F3AP84243 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 PSMD8P1-201ENST00000436275 769 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.87□□□□□ -1.47
H3F3AP84243 GAPDHP37-201ENST00000442317 968 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.87□□□□□ -1.47
H3F3AP84243 AL020997.1-201ENST00000446554 349 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 PPIAP32-201ENST00000449940 472 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.87□□□□□ -1.47
H3F3AP84243 AC115223.1-201ENST00000466377 870 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 AC068522.1-201ENST00000482895 345 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.87□□□□□ -1.47
H3F3AP84243 RPL5P14-201ENST00000494197 878 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.87□□□□□ -1.47
H3F3AP84243 AC093870.1-201ENST00000506837 213 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.87□□□□□ -1.47
H3F3AP84243 AC073581.1-201ENST00000519036 575 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.87□□□□□ -1.47
H3F3AP84243 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
H3F3AP84243 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.87□□□□□ -1.47
H3F3AP84243 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.87□□□□□ -1.47
H3F3AP84243 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.87□□□□□ -1.47
H3F3AP84243 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
H3F3AP84243 AP001264.1-201ENST00000620602 703 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 AC211486.4-201ENST00000621495 113 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 AL117378.2-201ENST00000622916 1337 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
H3F3AP84243 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
H3F3AP84243 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms