Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.45□□□□□ -1.54
CX3CL1P78423 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.45□□□□□ -1.54
CX3CL1P78423 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.45□□□□□ -1.54
CX3CL1P78423 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.45□□□□□ -1.54
CX3CL1P78423 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 ZNF658B-201ENST00000602828 3408 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 CREM-216ENST00000429130 1476 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AL157831.2-201ENST00000564681 3095 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CX3CL1P78423 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.44□□□□□ -1.54
CX3CL1P78423 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC022905.1-201ENST00000503430 3048 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 OR10D1P-201ENST00000355343 936 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 RNA5SP176-201ENST00000390956 110 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 MIR541-201ENST00000401360 84 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 AL512329.1-201ENST00000404600 1592 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 USP9YP19-201ENST00000412165 485 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC106901.1-201ENST00000425086 698 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 AL392003.1-201ENST00000434394 243 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 RN7SL492P-201ENST00000460700 295 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 RN7SL868P-201ENST00000485915 303 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.44□□□□□ -1.54
CX3CL1P78423 EIF4E2P2-201ENST00000492033 736 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC114940.1-201ENST00000512162 1265 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC011352.2-201ENST00000514574 1016 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 MTCYBP44-201ENST00000514835 823 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 RNA5SP278-201ENST00000517055 102 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 AC104997.1-201ENST00000519761 717 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.44□□□□□ -1.54
CX3CL1P78423 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AL035410.2-201ENST00000604963 864 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.44□□□□□ -1.54
CX3CL1P78423 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC020763.5-201ENST00000623298 430 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 OR51C1P-202ENST00000641159 1444 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 MKI67P1-201ENST00000604297 1460 ntBASIC5.44□□□□□ -1.54
CX3CL1P78423 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CL1P78423 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CX3CL1P78423 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.44□□□□□ -1.54
CX3CL1P78423 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CL1P78423 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CL1P78423 TRIM53CP-201ENST00000531490 1354 ntBASIC5.43□□□□□ -1.54
CX3CL1P78423 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CL1P78423 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CL1P78423 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms