Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.08□□□□□ -1.28
NEK3P51956 AC020923.1-201ENST00000624021 917 ntBASIC7.08□□□□□ -1.28
NEK3P51956 AC105114.1-201ENST00000624795 1862 ntBASIC7.08□□□□□ -1.28
NEK3P51956 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
NEK3P51956 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.08□□□□□ -1.28
NEK3P51956 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEK3P51956 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NEK3P51956 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.08□□□□□ -1.28
NEK3P51956 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEK3P51956 MTND4P21-201ENST00000453886 1357 ntBASIC7.08□□□□□ -1.28
NEK3P51956 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEK3P51956 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.07□□□□□ -1.28
NEK3P51956 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
NEK3P51956 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.07□□□□□ -1.28
NEK3P51956 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.07□□□□□ -1.28
NEK3P51956 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.07□□□□□ -1.28
NEK3P51956 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.07□□□□□ -1.28
NEK3P51956 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NEK3P51956 AL359715.1-201ENST00000404330 555 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AL136100.1-201ENST00000407696 330 ntBASIC7.07□□□□□ -1.28
NEK3P51956 RN7SKP271-201ENST00000410528 320 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AC019070.1-201ENST00000415008 1024 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.07□□□□□ -1.28
NEK3P51956 MTCO1P51-201ENST00000427672 1060 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.07□□□□□ -1.28
NEK3P51956 MTCO1P45-201ENST00000431457 267 ntBASIC7.07□□□□□ -1.28
NEK3P51956 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 BMS1P11-201ENST00000442351 885 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AL845321.1-201ENST00000444603 348 ntBASIC7.07□□□□□ -1.28
NEK3P51956 BMS1P9-201ENST00000457640 885 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.07□□□□□ -1.28
NEK3P51956 NFU1-207ENST00000462320 558 ntTSL 4 BASIC7.07□□□□□ -1.28
NEK3P51956 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.07□□□□□ -1.28
NEK3P51956 AC108157.1-201ENST00000510511 539 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.07□□□□□ -1.28
NEK3P51956 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.07□□□□□ -1.28
NEK3P51956 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.07□□□□□ -1.28
NEK3P51956 EIF4A3P1-201ENST00000578499 647 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AC011447.2-201ENST00000592921 283 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.07□□□□□ -1.28
NEK3P51956 U91328.4-201ENST00000608919 517 ntBASIC7.07□□□□□ -1.28
NEK3P51956 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AC131009.3-201ENST00000621809 287 ntBASIC7.07□□□□□ -1.28
NEK3P51956 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
NEK3P51956 AC106782.7-201ENST00000624024 418 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AC133555.5-201ENST00000624430 418 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.07□□□□□ -1.28
NEK3P51956 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 AC083806.2-201ENST00000617795 2685 ntBASIC7.07□□□□□ -1.28
NEK3P51956 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NEK3P51956 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.07□□□□□ -1.28
NEK3P51956 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.07□□□□□ -1.28
NEK3P51956 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
NEK3P51956 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.07□□□□□ -1.28
NEK3P51956 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEK3P51956 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.06□□□□□ -1.28
NEK3P51956 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NEK3P51956 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 TPTE2P2-201ENST00000403471 1466 ntBASIC7.06□□□□□ -1.28
NEK3P51956 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.06□□□□□ -1.28
NEK3P51956 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.06□□□□□ -1.28
NEK3P51956 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
NEK3P51956 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NEK3P51956 METTL5-202ENST00000308099 629 ntTSL 3 BASIC7.06□□□□□ -1.28
NEK3P51956 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.06□□□□□ -1.28
NEK3P51956 USP9YP19-201ENST00000412165 485 ntBASIC7.06□□□□□ -1.28
NEK3P51956 AL672212.1-201ENST00000422246 400 ntBASIC7.06□□□□□ -1.28
NEK3P51956 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.06□□□□□ -1.28
NEK3P51956 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.06□□□□□ -1.28
NEK3P51956 AC007365.2-201ENST00000428806 458 ntBASIC7.06□□□□□ -1.28
NEK3P51956 MTND4LP14-201ENST00000429447 288 ntBASIC7.06□□□□□ -1.28
NEK3P51956 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.06□□□□□ -1.28
NEK3P51956 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.06□□□□□ -1.28
NEK3P51956 MYL6P3-201ENST00000436904 432 ntBASIC7.06□□□□□ -1.28
NEK3P51956 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEK3P51956 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms