Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSR1P43307 AC068870.3-201ENST00000625077 2536 ntBASIC7.07□□□□□ -1.28
SSR1P43307 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSR1P43307 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.07□□□□□ -1.28
SSR1P43307 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSR1P43307 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.07□□□□□ -1.28
SSR1P43307 Z97989.1-201ENST00000531702 2421 ntBASIC7.07□□□□□ -1.28
SSR1P43307 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSR1P43307 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SSR1P43307 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSR1P43307 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSR1P43307 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SSR1P43307 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.07□□□□□ -1.28
SSR1P43307 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.07□□□□□ -1.28
SSR1P43307 AC114402.2-201ENST00000432760 643 ntBASIC7.07□□□□□ -1.28
SSR1P43307 AL590128.1-201ENST00000433407 286 ntBASIC7.07□□□□□ -1.28
SSR1P43307 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.07□□□□□ -1.28
SSR1P43307 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.07□□□□□ -1.28
SSR1P43307 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.07□□□□□ -1.28
SSR1P43307 AC126615.1-201ENST00000470084 630 ntBASIC7.07□□□□□ -1.28
SSR1P43307 AC117395.1-201ENST00000487390 403 ntBASIC7.07□□□□□ -1.28
SSR1P43307 RN7SL143P-201ENST00000496780 297 ntBASIC7.07□□□□□ -1.28
SSR1P43307 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC7.07□□□□□ -1.28
SSR1P43307 RN7SKP248-201ENST00000516278 305 ntBASIC7.07□□□□□ -1.28
SSR1P43307 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.07□□□□□ -1.28
SSR1P43307 HNRNPCP8-201ENST00000528764 888 ntBASIC7.07□□□□□ -1.28
SSR1P43307 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.07□□□□□ -1.28
SSR1P43307 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.07□□□□□ -1.28
SSR1P43307 RN7SL689P-201ENST00000577215 297 ntBASIC7.07□□□□□ -1.28
SSR1P43307 MIR378C-201ENST00000578683 81 ntBASIC7.07□□□□□ -1.28
SSR1P43307 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.07□□□□□ -1.28
SSR1P43307 AL353807.4-201ENST00000604995 257 ntBASIC7.07□□□□□ -1.28
SSR1P43307 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.07□□□□□ -1.28
SSR1P43307 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.07□□□□□ -1.28
SSR1P43307 AC140479.4-205ENST00000636339 820 ntBASIC7.07□□□□□ -1.28
SSR1P43307 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.07□□□□□ -1.28
SSR1P43307 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
SSR1P43307 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSR1P43307 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSR1P43307 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSR1P43307 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SSR1P43307 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
SSR1P43307 MKI67P1-201ENST00000604297 1460 ntBASIC7.06□□□□□ -1.28
SSR1P43307 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 AC093671.1-201ENST00000624981 2929 ntBASIC7.06□□□□□ -1.28
SSR1P43307 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
SSR1P43307 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.06□□□□□ -1.28
SSR1P43307 OR2M1P-201ENST00000318104 951 ntBASIC7.06□□□□□ -1.28
SSR1P43307 OR11H13P-201ENST00000359695 979 ntBASIC7.06□□□□□ -1.28
SSR1P43307 RNA5SP512-201ENST00000364550 120 ntBASIC7.06□□□□□ -1.28
SSR1P43307 RNU1-55P-201ENST00000365510 158 ntBASIC7.06□□□□□ -1.28
SSR1P43307 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SSR1P43307 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 RN7SKP188-201ENST00000410789 317 ntBASIC7.06□□□□□ -1.28
SSR1P43307 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.06□□□□□ -1.28
SSR1P43307 AC009362.1-201ENST00000427253 406 ntBASIC7.06□□□□□ -1.28
SSR1P43307 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.06□□□□□ -1.28
SSR1P43307 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.06□□□□□ -1.28
SSR1P43307 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 SULT1D1P-201ENST00000458020 882 ntBASIC7.06□□□□□ -1.28
SSR1P43307 AF305872.1-201ENST00000485217 471 ntBASIC7.06□□□□□ -1.28
SSR1P43307 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.06□□□□□ -1.28
SSR1P43307 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SSR1P43307 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.06□□□□□ -1.28
SSR1P43307 AP001994.1-201ENST00000527539 826 ntBASIC7.06□□□□□ -1.28
SSR1P43307 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
SSR1P43307 AC140063.1-201ENST00000541343 259 ntBASIC7.06□□□□□ -1.28
SSR1P43307 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.06□□□□□ -1.28
SSR1P43307 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.06□□□□□ -1.28
SSR1P43307 AL132640.1-201ENST00000559594 619 ntBASIC7.06□□□□□ -1.28
SSR1P43307 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC7.06□□□□□ -1.28
SSR1P43307 MIR5682-201ENST00000584864 76 ntBASIC7.06□□□□□ -1.28
SSR1P43307 AL953862.2-201ENST00000603089 820 ntBASIC7.06□□□□□ -1.28
SSR1P43307 ACTG1P22-201ENST00000603793 1099 ntBASIC7.06□□□□□ -1.28
SSR1P43307 AL359704.2-201ENST00000604335 521 ntBASIC7.06□□□□□ -1.28
SSR1P43307 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.06□□□□□ -1.28
SSR1P43307 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.06□□□□□ -1.28
SSR1P43307 SNORA16A-202ENST00000628458 135 ntBASIC7.06□□□□□ -1.28
SSR1P43307 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 TRIM53CP-201ENST00000531490 1354 ntBASIC7.06□□□□□ -1.28
SSR1P43307 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.06□□□□□ -1.28
SSR1P43307 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSR1P43307 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SSR1P43307 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.06□□□□□ -1.28
SSR1P43307 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
SSR1P43307 IMMTP1-201ENST00000435590 2219 ntBASIC7.05□□□□□ -1.28
SSR1P43307 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 MTCO1P25-201ENST00000414449 1799 ntBASIC7.05□□□□□ -1.28
SSR1P43307 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.05□□□□□ -1.28
SSR1P43307 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms