Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR4786-201ENST00000583954 80 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 RN7SL664P-201ENST00000584239 305 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC020914.7-201ENST00000594477 545 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC113361.1-201ENST00000606683 543 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CXCL1P09341 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 FAM74A6-203ENST00000615956 481 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 AL157762.1-201ENST00000619612 415 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CXCL1P09341 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
CXCL1P09341 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CXCL1P09341 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
CXCL1P09341 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
CXCL1P09341 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
CXCL1P09341 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
CXCL1P09341 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.96□□□□□ -1.61
CXCL1P09341 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL1P09341 AP001284.1-201ENST00000528393 2118 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL1P09341 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CXCL1P09341 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CXCL1P09341 RN7SKP55-201ENST00000364888 307 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 SNORA70.3-201ENST00000365075 132 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
CXCL1P09341 AL049697.3-201ENST00000406493 982 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 AC009237.9-201ENST00000414800 347 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 AC002367.1-201ENST00000416765 405 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 CYCSP52-201ENST00000422857 310 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 AC239367.3-201ENST00000428996 814 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 HBBP1-201ENST00000433329 439 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC4.96□□□□□ -1.62
CXCL1P09341 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL1P09341 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL1P09341 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC4.96□□□□□ -1.62
CXCL1P09341 OSTCP1-201ENST00000455507 450 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 SNX18P26-201ENST00000458433 740 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC4.96□□□□□ -1.62
CXCL1P09341 RN7SL379P-201ENST00000479912 293 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 RN7SL143P-201ENST00000496780 297 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC4.96□□□□□ -1.62
CXCL1P09341 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL1P09341 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CXCL1P09341 AC008429.4-201ENST00000521201 182 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 OXR1-212ENST00000521592 993 ntTSL 5 BASIC4.96□□□□□ -1.62
CXCL1P09341 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC4.96□□□□□ -1.62
CXCL1P09341 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.96□□□□□ -1.62
CXCL1P09341 LYZ-202ENST00000548839 558 ntTSL 2 BASIC4.96□□□□□ -1.62
CXCL1P09341 AC090971.3-201ENST00000557871 1041 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL1P09341 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.96□□□□□ -1.62
CXCL1P09341 RN7SL689P-201ENST00000577215 297 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.96□□□□□ -1.62
CXCL1P09341 AC007262.1-201ENST00000604099 321 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 AC016590.3-201ENST00000611171 753 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 AC087894.3-201ENST00000623682 349 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 JAML-213ENST00000640745 951 ntTSL 5 BASIC4.96□□□□□ -1.62
CXCL1P09341 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CXCL1P09341 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CXCL1P09341 AC004076.2-201ENST00000620532 3323 ntBASIC4.96□□□□□ -1.62
CXCL1P09341 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CXCL1P09341 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL1P09341 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CXCL1P09341 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL1P09341 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CXCL1P09341 LINC02019-201ENST00000608605 2060 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL1P09341 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL1P09341 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.95□□□□□ -1.62
CXCL1P09341 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL1P09341 AC090114.1-201ENST00000393266 448 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL1P09341 EIF4A1P13-201ENST00000415667 230 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL1P09341 CYP4F30P-202ENST00000420048 405 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 TAS2R2P-201ENST00000421146 910 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC4.95□□□□□ -1.62
CXCL1P09341 AC016027.5-201ENST00000427227 210 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 Z68868.1-201ENST00000429048 544 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 OR13K1P-201ENST00000444577 975 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 VN1R38P-201ENST00000450265 887 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 GOT2P2-201ENST00000450663 1251 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL1P09341 RPLP0P1-201ENST00000457002 361 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL1P09341 TAAR3P-202ENST00000481759 1025 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 DEFB109A-201ENST00000482450 265 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC4.95□□□□□ -1.62
CXCL1P09341 AC008945.1-201ENST00000505144 499 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC4.95□□□□□ -1.62
CXCL1P09341 AC100854.1-201ENST00000520351 341 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms