Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 AL390719.1-204ENST00000412397 1219 ntBASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00474Q9P2X8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00474Q9P2X8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.9□□□□□ -0.35
LINC00474Q9P2X8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
LINC00474Q9P2X8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00474Q9P2X8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00474Q9P2X8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00474Q9P2X8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00474Q9P2X8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 AC023632.3-201ENST00000521633 145 ntBASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00474Q9P2X8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 AL355472.2-201ENST00000422958 438 ntBASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 AC104771.1-201ENST00000603335 964 ntBASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms