Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
S1PR3Q99500 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.36■□□□□ 0.21
S1PR3Q99500 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.36■□□□□ 0.21
S1PR3Q99500 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.36■□□□□ 0.21
S1PR3Q99500 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.36■□□□□ 0.21
S1PR3Q99500 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
S1PR3Q99500 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
S1PR3Q99500 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
S1PR3Q99500 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.35■□□□□ 0.21
S1PR3Q99500 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
S1PR3Q99500 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
S1PR3Q99500 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.35■□□□□ 0.21
S1PR3Q99500 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.35■□□□□ 0.21
S1PR3Q99500 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
S1PR3Q99500 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.35■□□□□ 0.21
S1PR3Q99500 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.35■□□□□ 0.21
S1PR3Q99500 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
S1PR3Q99500 AL512625.2-201ENST00000417533 625 ntBASIC16.35■□□□□ 0.21
S1PR3Q99500 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
S1PR3Q99500 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.35■□□□□ 0.21
S1PR3Q99500 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.35■□□□□ 0.21
S1PR3Q99500 AC090192.1-201ENST00000517740 490 ntBASIC16.35■□□□□ 0.21
S1PR3Q99500 AC133552.2-202ENST00000575694 574 ntBASIC16.35■□□□□ 0.21
S1PR3Q99500 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
S1PR3Q99500 AL050303.2-201ENST00000619798 666 ntBASIC16.35■□□□□ 0.21
S1PR3Q99500 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.35■□□□□ 0.21
S1PR3Q99500 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
S1PR3Q99500 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
S1PR3Q99500 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.35■□□□□ 0.21
S1PR3Q99500 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.35■□□□□ 0.21
S1PR3Q99500 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.35■□□□□ 0.21
S1PR3Q99500 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
S1PR3Q99500 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
S1PR3Q99500 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.34■□□□□ 0.21
S1PR3Q99500 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
S1PR3Q99500 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
S1PR3Q99500 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
S1PR3Q99500 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
S1PR3Q99500 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
S1PR3Q99500 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.34■□□□□ 0.21
S1PR3Q99500 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
S1PR3Q99500 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.34■□□□□ 0.21
S1PR3Q99500 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.34■□□□□ 0.21
S1PR3Q99500 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.34■□□□□ 0.21
S1PR3Q99500 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
S1PR3Q99500 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.34■□□□□ 0.21
S1PR3Q99500 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
S1PR3Q99500 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.34■□□□□ 0.21
S1PR3Q99500 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.34■□□□□ 0.21
S1PR3Q99500 AC010980.2-201ENST00000587099 1412 ntBASIC16.34■□□□□ 0.21
S1PR3Q99500 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
S1PR3Q99500 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
S1PR3Q99500 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
S1PR3Q99500 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
S1PR3Q99500 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
S1PR3Q99500 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
S1PR3Q99500 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.33■□□□□ 0.21
S1PR3Q99500 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
S1PR3Q99500 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.33■□□□□ 0.21
S1PR3Q99500 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.33■□□□□ 0.21
S1PR3Q99500 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
S1PR3Q99500 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.33■□□□□ 0.2
S1PR3Q99500 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 HLA-G-202ENST00000376815 851 ntBASIC16.33■□□□□ 0.2
S1PR3Q99500 HLA-G-203ENST00000376818 1127 ntBASIC16.33■□□□□ 0.2
S1PR3Q99500 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.33■□□□□ 0.2
S1PR3Q99500 AF201337.1-201ENST00000520239 748 ntBASIC16.33■□□□□ 0.2
S1PR3Q99500 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.33■□□□□ 0.2
S1PR3Q99500 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.33■□□□□ 0.2
S1PR3Q99500 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.33■□□□□ 0.2
S1PR3Q99500 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 KRT16P6-202ENST00000425692 1426 ntBASIC16.33■□□□□ 0.2
S1PR3Q99500 KRT8P17-201ENST00000453110 1448 ntBASIC16.33■□□□□ 0.2
S1PR3Q99500 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 TMEM179-206ENST00000616017 1645 ntBASIC16.33■□□□□ 0.2
S1PR3Q99500 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.33■□□□□ 0.2
S1PR3Q99500 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.33■□□□□ 0.2
S1PR3Q99500 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
S1PR3Q99500 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.33■□□□□ 0.2
S1PR3Q99500 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms