Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RNF20Q5VTR2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF20Q5VTR2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.69■■□□□ 1.38
RNF20Q5VTR2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF20Q5VTR2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF20Q5VTR2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF20Q5VTR2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF20Q5VTR2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF20Q5VTR2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF20Q5VTR2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 AC073210.2-201ENST00000430369 194 ntBASIC23.68■■□□□ 1.38
RNF20Q5VTR2 AC097658.1-201ENST00000475555 843 ntBASIC23.68■■□□□ 1.38
RNF20Q5VTR2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 AL109923.1-201ENST00000618799 583 ntBASIC23.68■■□□□ 1.38
RNF20Q5VTR2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 AC125437.2-201ENST00000625180 2167 ntBASIC23.68■■□□□ 1.38
RNF20Q5VTR2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF20Q5VTR2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 AC090192.1-201ENST00000517740 490 ntBASIC23.67■■□□□ 1.38
RNF20Q5VTR2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 AC005829.2-201ENST00000571422 1056 ntBASIC23.67■■□□□ 1.38
RNF20Q5VTR2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF20Q5VTR2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF20Q5VTR2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 MYC-209ENST00000641252 345 ntBASIC23.65■■□□□ 1.38
RNF20Q5VTR2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF20Q5VTR2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms