Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.16■□□□□ 0.98
BRCC3P46736 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.16■□□□□ 0.98
BRCC3P46736 AP006587.1-201ENST00000534129 1502 ntBASIC21.16■□□□□ 0.98
BRCC3P46736 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
BRCC3P46736 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
BRCC3P46736 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRCC3P46736 AL353807.1-201ENST00000427475 662 ntBASIC21.16■□□□□ 0.98
BRCC3P46736 ECEL1P3-201ENST00000427961 737 ntBASIC21.16■□□□□ 0.98
BRCC3P46736 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.16■□□□□ 0.98
BRCC3P46736 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.16■□□□□ 0.98
BRCC3P46736 AC073195.1-201ENST00000607241 877 ntBASIC21.16■□□□□ 0.98
BRCC3P46736 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
BRCC3P46736 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRCC3P46736 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRCC3P46736 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRCC3P46736 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
BRCC3P46736 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
BRCC3P46736 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
BRCC3P46736 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.15■□□□□ 0.98
BRCC3P46736 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.15■□□□□ 0.98
BRCC3P46736 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 AC211429.1-201ENST00000415277 523 ntBASIC21.15■□□□□ 0.98
BRCC3P46736 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.15■□□□□ 0.98
BRCC3P46736 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
BRCC3P46736 AP002982.1-201ENST00000492365 877 ntBASIC21.15■□□□□ 0.98
BRCC3P46736 AP003071.4-201ENST00000562276 1284 ntBASIC21.15■□□□□ 0.98
BRCC3P46736 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
BRCC3P46736 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.15■□□□□ 0.98
BRCC3P46736 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 AC020907.5-201ENST00000624372 1936 ntBASIC21.15■□□□□ 0.98
BRCC3P46736 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCC3P46736 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
BRCC3P46736 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
BRCC3P46736 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.14■□□□□ 0.98
BRCC3P46736 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
BRCC3P46736 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
BRCC3P46736 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.14■□□□□ 0.97
BRCC3P46736 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.14■□□□□ 0.97
BRCC3P46736 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
BRCC3P46736 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRCC3P46736 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRCC3P46736 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.14■□□□□ 0.97
BRCC3P46736 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.14■□□□□ 0.97
BRCC3P46736 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.14■□□□□ 0.97
BRCC3P46736 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BRCC3P46736 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.14■□□□□ 0.97
BRCC3P46736 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.14■□□□□ 0.97
BRCC3P46736 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.14■□□□□ 0.97
BRCC3P46736 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.14■□□□□ 0.97
BRCC3P46736 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.14■□□□□ 0.97
BRCC3P46736 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.14■□□□□ 0.97
BRCC3P46736 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRCC3P46736 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRCC3P46736 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
BRCC3P46736 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRCC3P46736 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BRCC3P46736 PHGDH-210ENST00000641115 1638 ntBASIC21.14■□□□□ 0.97
BRCC3P46736 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRCC3P46736 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
BRCC3P46736 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRCC3P46736 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.13■□□□□ 0.97
BRCC3P46736 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.13■□□□□ 0.97
BRCC3P46736 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
BRCC3P46736 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRCC3P46736 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRCC3P46736 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
BRCC3P46736 AL355355.2-201ENST00000442321 338 ntBASIC21.13■□□□□ 0.97
BRCC3P46736 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.13■□□□□ 0.97
BRCC3P46736 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.13■□□□□ 0.97
BRCC3P46736 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.13■□□□□ 0.97
BRCC3P46736 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.13■□□□□ 0.97
BRCC3P46736 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.13■□□□□ 0.97
BRCC3P46736 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.13■□□□□ 0.97
BRCC3P46736 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRCC3P46736 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
BRCC3P46736 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRCC3P46736 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRCC3P46736 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BRCC3P46736 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BRCC3P46736 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
BRCC3P46736 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BRCC3P46736 BX119927.1-201ENST00000636596 1552 ntBASIC21.12■□□□□ 0.97
BRCC3P46736 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
BRCC3P46736 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BRCC3P46736 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.12■□□□□ 0.97
BRCC3P46736 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BRCC3P46736 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.12■□□□□ 0.97
BRCC3P46736 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BRCC3P46736 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.12■□□□□ 0.97
BRCC3P46736 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.12■□□□□ 0.97
BRCC3P46736 AL353708.3-201ENST00000610272 989 ntBASIC21.12■□□□□ 0.97
BRCC3P46736 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms