Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.25■□□□□ 0.35
Fen1P39749 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Fen1P39749 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Fen1P39749 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Fen1P39749 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.24■□□□□ 0.35
Fen1P39749 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Fen1P39749 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Fen1P39749 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fen1P39749 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Fen1P39749 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Fen1P39749 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Fen1P39749 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.23■□□□□ 0.35
Fen1P39749 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.23■□□□□ 0.35
Fen1P39749 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.23■□□□□ 0.35
Fen1P39749 Gm29791-202ENSMUST00000207888 369 ntBASIC17.23■□□□□ 0.35
Fen1P39749 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.23■□□□□ 0.35
Fen1P39749 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.23■□□□□ 0.35
Fen1P39749 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 Gm10602-201ENSMUST00000098239 609 ntBASIC17.23■□□□□ 0.35
Fen1P39749 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Fen1P39749 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Fen1P39749 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fen1P39749 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.22■□□□□ 0.35
Fen1P39749 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.22■□□□□ 0.35
Fen1P39749 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Fen1P39749 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Fen1P39749 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fen1P39749 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Fen1P39749 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.21■□□□□ 0.35
Fen1P39749 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.21■□□□□ 0.35
Fen1P39749 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.21■□□□□ 0.35
Fen1P39749 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Fen1P39749 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fen1P39749 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Fen1P39749 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Fen1P39749 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Fen1P39749 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Fen1P39749 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Fen1P39749 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Fen1P39749 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Fen1P39749 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Fen1P39749 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.2■□□□□ 0.34
Fen1P39749 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Fen1P39749 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fen1P39749 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fen1P39749 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.2■□□□□ 0.34
Fen1P39749 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fen1P39749 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fen1P39749 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.2■□□□□ 0.34
Fen1P39749 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fen1P39749 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fen1P39749 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Fen1P39749 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fen1P39749 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms