Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.6■■□□□ 1.05
RFX1P22670 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.6■■□□□ 1.05
RFX1P22670 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
RFX1P22670 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.59■■□□□ 1.05
RFX1P22670 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX1P22670 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX1P22670 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX1P22670 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX1P22670 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.59■■□□□ 1.05
RFX1P22670 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.59■■□□□ 1.05
RFX1P22670 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX1P22670 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.59■■□□□ 1.05
RFX1P22670 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX1P22670 ECEL1P3-201ENST00000427961 737 ntBASIC21.59■■□□□ 1.05
RFX1P22670 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.59■■□□□ 1.05
RFX1P22670 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.59■■□□□ 1.05
RFX1P22670 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.59■■□□□ 1.05
RFX1P22670 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.59■■□□□ 1.05
RFX1P22670 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.59■■□□□ 1.05
RFX1P22670 AL031963.3-201ENST00000606441 850 ntBASIC21.59■■□□□ 1.05
RFX1P22670 AL359736.2-201ENST00000621992 437 ntBASIC21.59■■□□□ 1.05
RFX1P22670 AC073912.3-201ENST00000624414 853 ntBASIC21.59■■□□□ 1.05
RFX1P22670 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX1P22670 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.59■■□□□ 1.05
RFX1P22670 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RFX1P22670 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RFX1P22670 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.59■■□□□ 1.05
RFX1P22670 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFX1P22670 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.58■■□□□ 1.05
RFX1P22670 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFX1P22670 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFX1P22670 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.58■■□□□ 1.05
RFX1P22670 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFX1P22670 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.58■■□□□ 1.05
RFX1P22670 KRT8P17-201ENST00000453110 1448 ntBASIC21.58■■□□□ 1.05
RFX1P22670 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFX1P22670 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFX1P22670 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
RFX1P22670 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
RFX1P22670 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RFX1P22670 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFX1P22670 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFX1P22670 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFX1P22670 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RFX1P22670 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.58■■□□□ 1.04
RFX1P22670 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.58■■□□□ 1.04
RFX1P22670 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFX1P22670 AL691432.2-201ENST00000607222 2038 ntBASIC21.58■■□□□ 1.04
RFX1P22670 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX1P22670 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX1P22670 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX1P22670 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX1P22670 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RFX1P22670 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RFX1P22670 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX1P22670 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX1P22670 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX1P22670 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX1P22670 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX1P22670 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.57■■□□□ 1.04
RFX1P22670 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.57■■□□□ 1.04
RFX1P22670 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.57■■□□□ 1.04
RFX1P22670 C1QBPP2-201ENST00000528754 825 ntBASIC21.57■■□□□ 1.04
RFX1P22670 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.57■■□□□ 1.04
RFX1P22670 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.57■■□□□ 1.04
RFX1P22670 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX1P22670 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.57■■□□□ 1.04
RFX1P22670 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX1P22670 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
RFX1P22670 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFX1P22670 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
RFX1P22670 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX1P22670 KRT8P20-201ENST00000423953 1409 ntBASIC21.56■■□□□ 1.04
RFX1P22670 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFX1P22670 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RFX1P22670 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.56■■□□□ 1.04
RFX1P22670 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.56■■□□□ 1.04
RFX1P22670 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFX1P22670 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFX1P22670 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RFX1P22670 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX1P22670 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RFX1P22670 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.56■■□□□ 1.04
RFX1P22670 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.56■■□□□ 1.04
RFX1P22670 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX1P22670 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX1P22670 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RFX1P22670 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFX1P22670 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RFX1P22670 AFG3L1P-217ENST00000557444 2447 ntBASIC21.56■■□□□ 1.04
RFX1P22670 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.56■■□□□ 1.04
RFX1P22670 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.56■■□□□ 1.04
RFX1P22670 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.56■■□□□ 1.04
RFX1P22670 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.56■■□□□ 1.04
RFX1P22670 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RFX1P22670 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.55■■□□□ 1.04
RFX1P22670 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX1P22670 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms