Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.4□□□□□ -0.1
Cd74P04441 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cd74P04441 Gm37055-201ENSMUST00000191866 133 ntBASIC14.4□□□□□ -0.1
Cd74P04441 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.4□□□□□ -0.1
Cd74P04441 Mtag2-201ENSMUST00000058665 714 ntBASIC14.4□□□□□ -0.1
Cd74P04441 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cd74P04441 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cd74P04441 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.4□□□□□ -0.1
Cd74P04441 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd74P04441 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.39□□□□□ -0.11
Cd74P04441 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.39□□□□□ -0.11
Cd74P04441 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Mir6349-201ENSMUST00000184059 97 ntBASIC14.39□□□□□ -0.11
Cd74P04441 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.39□□□□□ -0.11
Cd74P04441 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cd74P04441 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd74P04441 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cd74P04441 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Gm13836-201ENSMUST00000121159 501 ntBASIC14.38□□□□□ -0.11
Cd74P04441 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Cd74P04441 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.38□□□□□ -0.11
Cd74P04441 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd74P04441 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cd74P04441 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.37□□□□□ -0.11
Cd74P04441 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.37□□□□□ -0.11
Cd74P04441 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cd74P04441 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd74P04441 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cd74P04441 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cd74P04441 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cd74P04441 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cd74P04441 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd74P04441 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd74P04441 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cd74P04441 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cd74P04441 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cd74P04441 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cd74P04441 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd74P04441 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd74P04441 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd74P04441 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Cd74P04441 Gm18025-201ENSMUST00000221733 862 ntBASIC14.36□□□□□ -0.11
Cd74P04441 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cd74P04441 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.36□□□□□ -0.11
Cd74P04441 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd74P04441 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd74P04441 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cd74P04441 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cd74P04441 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cd74P04441 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms