Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTNP04004 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTNP04004 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTNP04004 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.8■■□□□ 1.08
VTNP04004 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.8■■□□□ 1.08
VTNP04004 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
VTNP04004 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.8■■□□□ 1.08
VTNP04004 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
VTNP04004 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VTNP04004 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
VTNP04004 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VTNP04004 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.8■■□□□ 1.08
VTNP04004 TFP1-202ENST00000475455 1573 ntBASIC21.8■■□□□ 1.08
VTNP04004 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
VTNP04004 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VTNP04004 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
VTNP04004 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VTNP04004 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.8■■□□□ 1.08
VTNP04004 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTNP04004 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTNP04004 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
VTNP04004 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTNP04004 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.8■■□□□ 1.08
VTNP04004 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.8■■□□□ 1.08
VTNP04004 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTNP04004 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.79■■□□□ 1.08
VTNP04004 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.79■■□□□ 1.08
VTNP04004 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTNP04004 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTNP04004 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
VTNP04004 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTNP04004 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTNP04004 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.79■■□□□ 1.08
VTNP04004 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTNP04004 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.79■■□□□ 1.08
VTNP04004 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VTNP04004 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.79■■□□□ 1.08
VTNP04004 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTNP04004 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTNP04004 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VTNP04004 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTNP04004 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
VTNP04004 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
VTNP04004 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
VTNP04004 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.78■■□□□ 1.08
VTNP04004 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VTNP04004 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTNP04004 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VTNP04004 PKD1P6-201ENST00000343738 4769 ntBASIC21.78■■□□□ 1.08
VTNP04004 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTNP04004 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
VTNP04004 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.78■■□□□ 1.08
VTNP04004 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTNP04004 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
VTNP04004 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.78■■□□□ 1.08
VTNP04004 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.78■■□□□ 1.08
VTNP04004 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.78■■□□□ 1.08
VTNP04004 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
VTNP04004 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.78■■□□□ 1.08
VTNP04004 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.78■■□□□ 1.08
VTNP04004 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
VTNP04004 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VTNP04004 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTNP04004 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTNP04004 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
VTNP04004 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
VTNP04004 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VTNP04004 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.78■■□□□ 1.08
VTNP04004 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTNP04004 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
VTNP04004 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTNP04004 PHGDH-210ENST00000641115 1638 ntBASIC21.77■■□□□ 1.08
VTNP04004 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTNP04004 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VTNP04004 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTNP04004 AC087499.1-201ENST00000418141 1075 ntBASIC21.77■■□□□ 1.08
VTNP04004 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
VTNP04004 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.77■■□□□ 1.08
VTNP04004 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.77■■□□□ 1.08
VTNP04004 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTNP04004 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VTNP04004 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.77■■□□□ 1.08
VTNP04004 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.77■■□□□ 1.08
VTNP04004 AL353708.3-201ENST00000610272 989 ntBASIC21.77■■□□□ 1.08
VTNP04004 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VTNP04004 AC073314.1-201ENST00000568729 2216 ntBASIC21.77■■□□□ 1.08
VTNP04004 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTNP04004 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.77■■□□□ 1.08
VTNP04004 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
VTNP04004 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
VTNP04004 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
VTNP04004 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.76■■□□□ 1.07
VTNP04004 AC020907.5-201ENST00000624372 1936 ntBASIC21.76■■□□□ 1.07
VTNP04004 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.76■■□□□ 1.07
VTNP04004 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VTNP04004 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTNP04004 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
VTNP04004 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTNP04004 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTNP04004 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms