Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.8□□□□□ -0.04
SNAI2O43623 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SNAI2O43623 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.8□□□□□ -0.04
SNAI2O43623 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
SNAI2O43623 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.8□□□□□ -0.04
SNAI2O43623 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.8□□□□□ -0.04
SNAI2O43623 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.8□□□□□ -0.04
SNAI2O43623 AC138907.5-202ENST00000569484 235 ntBASIC14.8□□□□□ -0.04
SNAI2O43623 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SNAI2O43623 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SNAI2O43623 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SNAI2O43623 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
SNAI2O43623 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
SNAI2O43623 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SNAI2O43623 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNAI2O43623 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SNAI2O43623 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.79□□□□□ -0.04
SNAI2O43623 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.79□□□□□ -0.04
SNAI2O43623 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.79□□□□□ -0.04
SNAI2O43623 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.79□□□□□ -0.04
SNAI2O43623 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.79□□□□□ -0.04
SNAI2O43623 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
SNAI2O43623 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SNAI2O43623 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 KRT87P-202ENST00000534226 1464 ntBASIC14.79□□□□□ -0.04
SNAI2O43623 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
SNAI2O43623 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 AC120498.10-201ENST00000621827 505 ntBASIC14.79□□□□□ -0.04
SNAI2O43623 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.79□□□□□ -0.04
SNAI2O43623 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.79□□□□□ -0.04
SNAI2O43623 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNAI2O43623 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.78□□□□□ -0.04
SNAI2O43623 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SNAI2O43623 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 HTR7P1-202ENST00000624664 4411 ntBASIC14.78□□□□□ -0.04
SNAI2O43623 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.78□□□□□ -0.04
SNAI2O43623 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SNAI2O43623 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.78□□□□□ -0.04
SNAI2O43623 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SNAI2O43623 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SNAI2O43623 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.78□□□□□ -0.04
SNAI2O43623 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.78□□□□□ -0.04
SNAI2O43623 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.78□□□□□ -0.04
SNAI2O43623 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SNAI2O43623 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SNAI2O43623 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SNAI2O43623 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SNAI2O43623 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SNAI2O43623 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.78□□□□□ -0.04
SNAI2O43623 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.78□□□□□ -0.04
SNAI2O43623 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNAI2O43623 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNAI2O43623 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.77□□□□□ -0.04
SNAI2O43623 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNAI2O43623 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNAI2O43623 BX119927.1-201ENST00000636596 1552 ntBASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms