Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC004232.2-201ENST00000574245 821 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC005726.4-201ENST00000582858 458 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC026898.1-201ENST00000586404 571 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC010615.3-201ENST00000597319 394 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC005702.3-201ENST00000585345 1447 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC009135.2-201ENST00000624136 1768 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 Z99129.4-201ENST00000624649 2435 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 RAD17P2-201ENST00000451754 1977 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 ASNSP6-201ENST00000592770 1618 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 SNORA38B-201ENST00000363524 131 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 MIR188-201ENST00000385034 86 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 NPM1P10-201ENST00000398310 865 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AL035422.1-201ENST00000414193 397 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC239367.3-201ENST00000428996 814 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 GTF2IP14-201ENST00000441415 586 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC007386.1-201ENST00000455212 582 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 RNU6-362P-201ENST00000516736 90 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AL133399.1-201ENST00000527476 298 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AP004609.2-201ENST00000532177 190 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 RPL3P13-201ENST00000550415 216 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AP003115.1-201ENST00000569849 463 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC079315.1-201ENST00000602952 623 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC100814.1-201ENST00000606963 623 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC026951.2-201ENST00000613847 241 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 SPATA31C2-201ENST00000324915 3777 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 AC104837.1-201ENST00000444644 1587 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 NCOA4P3-201ENST00000513203 1877 ntBASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
TRIM71Q2Q1W2 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms