Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDX1P47902 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDX1P47902 RNU1-56P-201ENST00000391303 164 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AP003170.5-201ENST00000397185 335 ntBASIC5.57□□□□□ -1.52
CDX1P47902 MRPL32P1-201ENST00000406301 247 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.57□□□□□ -1.52
CDX1P47902 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.57□□□□□ -1.52
CDX1P47902 AC244453.4-201ENST00000419150 388 ntBASIC5.57□□□□□ -1.52
CDX1P47902 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.57□□□□□ -1.52
CDX1P47902 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDX1P47902 UQCRHP1-204ENST00000424609 274 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.57□□□□□ -1.52
CDX1P47902 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.57□□□□□ -1.52
CDX1P47902 RPL21P33-201ENST00000444831 484 ntBASIC5.57□□□□□ -1.52
CDX1P47902 RSL24D1P2-201ENST00000445584 366 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.57□□□□□ -1.52
CDX1P47902 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.57□□□□□ -1.52
CDX1P47902 WBP1LP1-201ENST00000460451 896 ntBASIC5.57□□□□□ -1.52
CDX1P47902 RN7SL149P-201ENST00000465197 281 ntBASIC5.57□□□□□ -1.52
CDX1P47902 RPSAP48-201ENST00000466509 889 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AC026336.1-201ENST00000466577 351 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AC091982.1-202ENST00000473923 343 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AC131233.1-201ENST00000479200 955 ntBASIC5.57□□□□□ -1.52
CDX1P47902 LINC01085-203ENST00000511195 326 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AC114940.1-201ENST00000512162 1265 ntBASIC5.57□□□□□ -1.52
CDX1P47902 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.57□□□□□ -1.52
CDX1P47902 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.57□□□□□ -1.52
CDX1P47902 OR4A42P-201ENST00000531397 938 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.57□□□□□ -1.52
CDX1P47902 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC5.57□□□□□ -1.52
CDX1P47902 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.57□□□□□ -1.52
CDX1P47902 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.57□□□□□ -1.52
CDX1P47902 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDX1P47902 AC091193.1-201ENST00000604640 448 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AL355333.1-201ENST00000605632 279 ntBASIC5.57□□□□□ -1.52
CDX1P47902 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.57□□□□□ -1.52
CDX1P47902 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.57□□□□□ -1.52
CDX1P47902 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC5.57□□□□□ -1.52
CDX1P47902 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.57□□□□□ -1.52
CDX1P47902 AC026108.1-201ENST00000635444 547 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AC006453.3-201ENST00000635891 377 ntBASIC5.57□□□□□ -1.52
CDX1P47902 AL356585.10-201ENST00000641883 123 ntBASIC5.57□□□□□ -1.52
CDX1P47902 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDX1P47902 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDX1P47902 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.57□□□□□ -1.52
CDX1P47902 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.57□□□□□ -1.52
CDX1P47902 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDX1P47902 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDX1P47902 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.57□□□□□ -1.52
CDX1P47902 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDX1P47902 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.56□□□□□ -1.52
CDX1P47902 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 EEF1A1P20-201ENST00000514852 1386 ntBASIC5.56□□□□□ -1.52
CDX1P47902 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.56□□□□□ -1.52
CDX1P47902 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.56□□□□□ -1.52
CDX1P47902 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC5.56□□□□□ -1.52
CDX1P47902 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDX1P47902 RNU6-1055P-201ENST00000391085 107 ntBASIC5.56□□□□□ -1.52
CDX1P47902 RNA5SP53-201ENST00000391299 120 ntBASIC5.56□□□□□ -1.52
CDX1P47902 AL451046.1-201ENST00000406097 534 ntBASIC5.56□□□□□ -1.52
CDX1P47902 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.56□□□□□ -1.52
CDX1P47902 VDAC1P10-201ENST00000416715 891 ntBASIC5.56□□□□□ -1.52
CDX1P47902 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC5.56□□□□□ -1.52
CDX1P47902 AC021876.1-201ENST00000425959 359 ntBASIC5.56□□□□□ -1.52
CDX1P47902 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.56□□□□□ -1.52
CDX1P47902 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.56□□□□□ -1.52
CDX1P47902 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.56□□□□□ -1.52
CDX1P47902 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.56□□□□□ -1.52
CDX1P47902 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 RPLP0P1-201ENST00000457002 361 ntBASIC5.56□□□□□ -1.52
CDX1P47902 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 AC066616.1-201ENST00000486795 413 ntBASIC5.56□□□□□ -1.52
CDX1P47902 AL591122.1-201ENST00000487348 492 ntBASIC5.56□□□□□ -1.52
CDX1P47902 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 GOLGA5P1-201ENST00000507317 980 ntBASIC5.56□□□□□ -1.52
CDX1P47902 NPM1P52-201ENST00000518264 846 ntBASIC5.56□□□□□ -1.52
CDX1P47902 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.56□□□□□ -1.52
CDX1P47902 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 AP001646.2-201ENST00000528645 1156 ntBASIC5.56□□□□□ -1.52
CDX1P47902 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC5.56□□□□□ -1.52
CDX1P47902 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC5.56□□□□□ -1.52
CDX1P47902 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC5.56□□□□□ -1.52
CDX1P47902 AC100832.2-201ENST00000582080 776 ntBASIC5.56□□□□□ -1.52
CDX1P47902 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 342.2 ms