Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CXCL1P09341 OR5E1P-201ENST00000305754 927 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 RNA5SP302-201ENST00000364896 100 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 RNU6-316P-201ENST00000391027 107 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.98□□□□□ -1.61
CXCL1P09341 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.98□□□□□ -1.61
CXCL1P09341 AL096800.1-201ENST00000405326 893 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC4.98□□□□□ -1.61
CXCL1P09341 RN7SKP148-201ENST00000410179 275 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 IFNA12P-201ENST00000413147 571 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 AC117434.1-201ENST00000419971 836 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 BX119904.3-201ENST00000428194 957 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 AC009299.1-201ENST00000429684 717 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 USP24P1-201ENST00000433802 779 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 RPS10P3-201ENST00000439253 494 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 ATP5G1P6-201ENST00000451206 412 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC4.98□□□□□ -1.61
CXCL1P09341 AC008026.1-201ENST00000460492 447 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 AL591122.1-201ENST00000487348 492 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 AC079594.1-201ENST00000489757 331 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 AC026782.2-201ENST00000510845 636 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC4.98□□□□□ -1.61
CXCL1P09341 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 AP003084.1-201ENST00000524828 742 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC4.98□□□□□ -1.61
CXCL1P09341 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC4.98□□□□□ -1.61
CXCL1P09341 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC4.98□□□□□ -1.61
CXCL1P09341 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC4.98□□□□□ -1.61
CXCL1P09341 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.98□□□□□ -1.61
CXCL1P09341 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC4.98□□□□□ -1.61
CXCL1P09341 AC022726.2-201ENST00000634673 547 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
CXCL1P09341 AC130456.1-201ENST00000565085 1363 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CXCL1P09341 AL451064.2-201ENST00000623514 1654 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.98□□□□□ -1.61
CXCL1P09341 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.98□□□□□ -1.61
CXCL1P09341 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 AC010266.2-201ENST00000564741 3255 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 AL513523.1-201ENST00000417868 1309 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 AC102941.1-201ENST00000567616 1537 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 CDY19P-201ENST00000411668 1613 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 CDY18P-201ENST00000438294 1609 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CXCL1P09341 U3.1-201ENST00000362500 215 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 SNORA5.1-201ENST00000384275 131 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 SNORA35-201ENST00000386104 128 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 FAUP2-201ENST00000394301 401 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC015977.1-201ENST00000418887 292 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CXCL1P09341 MTND1P10-201ENST00000426108 832 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 AK3P5-201ENST00000432033 519 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
CXCL1P09341 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.97□□□□□ -1.61
CXCL1P09341 RPL21P33-201ENST00000444831 484 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL1P09341 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC4.97□□□□□ -1.61
CXCL1P09341 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL1P09341 AP000805.1-201ENST00000471604 784 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC117392.1-201ENST00000487061 596 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL1P09341 ST13P12-201ENST00000508958 1094 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 RPL37-205ENST00000509877 637 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC016559.1-201ENST00000511420 199 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 ADI1P2-201ENST00000514945 429 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 RNA5SP518-201ENST00000515957 119 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC233290.1-201ENST00000553021 1186 ntBASIC4.97□□□□□ -1.61
CXCL1P09341 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC4.97□□□□□ -1.61
CXCL1P09341 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC4.97□□□□□ -1.61
CXCL1P09341 RN7SL786P-201ENST00000579130 298 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms