Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CHL1O00533 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.3□□□□□ -1.08
CHL1O00533 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CHL1O00533 SNORD16-201ENST00000362803 99 ntBASIC8.3□□□□□ -1.08
CHL1O00533 YWHAZP6-201ENST00000399764 738 ntBASIC8.3□□□□□ -1.08
CHL1O00533 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC8.3□□□□□ -1.08
CHL1O00533 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.3□□□□□ -1.08
CHL1O00533 AL139158.1-201ENST00000424719 340 ntBASIC8.3□□□□□ -1.08
CHL1O00533 AC094019.1-201ENST00000434678 472 ntBASIC8.3□□□□□ -1.08
CHL1O00533 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC8.3□□□□□ -1.08
CHL1O00533 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC8.3□□□□□ -1.08
CHL1O00533 RN7SL168P-201ENST00000463821 279 ntBASIC8.3□□□□□ -1.08
CHL1O00533 RN7SL649P-201ENST00000496974 275 ntBASIC8.3□□□□□ -1.08
CHL1O00533 NPM1P27-201ENST00000502784 830 ntBASIC8.3□□□□□ -1.08
CHL1O00533 AC112484.3-201ENST00000505910 329 ntBASIC8.3□□□□□ -1.08
CHL1O00533 ZNF519P4-201ENST00000514008 125 ntBASIC8.3□□□□□ -1.08
CHL1O00533 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC8.3□□□□□ -1.08
CHL1O00533 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC8.3□□□□□ -1.08
CHL1O00533 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHL1O00533 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.3□□□□□ -1.08
CHL1O00533 AL078601.3-201ENST00000573303 535 ntBASIC8.3□□□□□ -1.08
CHL1O00533 AC005332.4-201ENST00000592752 579 ntBASIC8.3□□□□□ -1.08
CHL1O00533 AL589863.1-201ENST00000595383 631 ntBASIC8.3□□□□□ -1.08
CHL1O00533 AC097467.4-201ENST00000605504 141 ntBASIC8.3□□□□□ -1.08
CHL1O00533 MIR6721-201ENST00000617181 87 ntBASIC8.3□□□□□ -1.08
CHL1O00533 MIR6806-201ENST00000622141 64 ntBASIC8.3□□□□□ -1.08
CHL1O00533 AC073862.4-201ENST00000622982 854 ntBASIC8.3□□□□□ -1.08
CHL1O00533 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CHL1O00533 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHL1O00533 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHL1O00533 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.3□□□□□ -1.08
CHL1O00533 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.3□□□□□ -1.08
CHL1O00533 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.3□□□□□ -1.08
CHL1O00533 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHL1O00533 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CHL1O00533 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CHL1O00533 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 BRD7P1-201ENST00000557705 1915 ntBASIC8.29□□□□□ -1.08
CHL1O00533 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.29□□□□□ -1.08
CHL1O00533 AC110373.1-201ENST00000505994 3505 ntBASIC8.29□□□□□ -1.08
CHL1O00533 RNA5SP279-201ENST00000365513 117 ntBASIC8.29□□□□□ -1.08
CHL1O00533 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 MIR188-201ENST00000385034 86 ntBASIC8.29□□□□□ -1.08
CHL1O00533 AL050335.1-201ENST00000396909 869 ntBASIC8.29□□□□□ -1.08
CHL1O00533 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.29□□□□□ -1.08
CHL1O00533 EMC3-AS1-205ENST00000438698 534 ntBASIC8.29□□□□□ -1.08
CHL1O00533 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.29□□□□□ -1.08
CHL1O00533 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC8.29□□□□□ -1.08
CHL1O00533 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC8.29□□□□□ -1.08
CHL1O00533 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.29□□□□□ -1.08
CHL1O00533 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.29□□□□□ -1.08
CHL1O00533 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.29□□□□□ -1.08
CHL1O00533 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.29□□□□□ -1.08
CHL1O00533 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
CHL1O00533 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.29□□□□□ -1.08
CHL1O00533 AL078623.1-201ENST00000602702 907 ntBASIC8.29□□□□□ -1.08
CHL1O00533 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.29□□□□□ -1.08
CHL1O00533 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.29□□□□□ -1.08
CHL1O00533 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHL1O00533 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CHL1O00533 AC125238.2-201ENST00000430003 1440 ntBASIC8.29□□□□□ -1.08
CHL1O00533 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHL1O00533 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHL1O00533 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.28□□□□□ -1.08
CHL1O00533 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHL1O00533 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC8.28□□□□□ -1.08
CHL1O00533 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHL1O00533 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.28□□□□□ -1.08
CHL1O00533 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CHL1O00533 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms