Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 OLMALINC-203ENST00000641087 3779 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC090114.1-201ENST00000393266 448 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 RN7SKP221-201ENST00000410420 301 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC073508.1-201ENST00000428866 656 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AL606517.1-201ENST00000446914 387 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC098826.2-201ENST00000452011 651 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 OFD1P3Y-201ENST00000453312 783 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC108751.3-201ENST00000461814 1020 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 RN7SL306P-201ENST00000492941 296 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 RN7SL104P-201ENST00000498686 293 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC093801.2-201ENST00000503966 1050 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 OR7A8P-201ENST00000595427 913 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AL589765.5-201ENST00000596133 515 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AF129408.1-201ENST00000608767 431 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AL590410.1-201ENST00000617925 333 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AL138955.1-201ENST00000622881 1040 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC073488.7-201ENST00000633785 778 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC119674.1-204ENST00000641348 1343 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AL356361.1-201ENST00000400943 1459 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 AC009831.5-201ENST00000624000 3189 ntBASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
AMBRA1Q9C0C7 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
AMBRA1Q9C0C7 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.46□□□□□ -1.37
AMBRA1Q9C0C7 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
AMBRA1Q9C0C7 AL137918.1-201ENST00000624542 1922 ntBASIC6.46□□□□□ -1.37
AMBRA1Q9C0C7 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
AMBRA1Q9C0C7 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
AMBRA1Q9C0C7 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.46□□□□□ -1.37
AMBRA1Q9C0C7 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
AMBRA1Q9C0C7 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
AMBRA1Q9C0C7 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 RNU4-39P-201ENST00000362455 127 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 SNORA63.3-201ENST00000362682 132 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 RNU6-152P-201ENST00000384037 107 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AL035405.1-201ENST00000400795 710 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 ATP5F1P6-201ENST00000402768 767 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 RNU2-18P-201ENST00000411224 162 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AL713922.1-201ENST00000416477 747 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 MTCO2P17-201ENST00000424336 677 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC073476.1-201ENST00000452854 407 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 RPS10P28-201ENST00000480396 498 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC113192.3-201ENST00000529152 742 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms