Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 RNU5A-2P-201ENST00000384337 116 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC113608.1-201ENST00000398740 305 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 SNORA2C-201ENST00000408564 137 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 RPL12P10-201ENST00000413498 498 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 GRPEL2P2-201ENST00000421856 670 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 RPL6P2-201ENST00000425480 783 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 E2F6P1-201ENST00000428850 745 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 HMGN1P6-201ENST00000438508 291 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 ARF4P4-201ENST00000439608 520 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC073052.1-201ENST00000440417 714 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 E2F6P3-201ENST00000441743 743 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 GTF2F2P2-201ENST00000445825 721 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC009961.3-201ENST00000449832 765 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 RPL12P40-201ENST00000467028 488 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC233724.10-201ENST00000510454 409 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 MTND2P26-201ENST00000528255 1029 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC040162.2-201ENST00000573092 157 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC011451.2-201ENST00000604303 598 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 CUX2P1-201ENST00000606426 298 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC013468.1-201ENST00000608680 598 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC103591.3-201ENST00000608684 209 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AL022238.3-201ENST00000609279 443 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC109347.2-201ENST00000610220 349 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC015804.1-201ENST00000622935 435 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC073488.8-201ENST00000631952 757 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC003992.1-201ENST00000635364 557 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 SF3A3P1-201ENST00000446317 1477 ntBASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.26□□□□□ -1.41
SSBP3Q9BWW4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 SNORA73B-201ENST00000363217 204 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 RNU4-68P-201ENST00000364314 141 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 RNU6-636P-201ENST00000384598 107 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 RPS3AP26-201ENST00000398259 784 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 VN1R35P-201ENST00000428102 693 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC093422.3-201ENST00000428506 305 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 IFNNP1-201ENST00000429219 553 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms