Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NDUFB4P1-201ENST00000462398 381 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 RN7SL688P-201ENST00000471754 275 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 RPL12P24-201ENST00000474907 486 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC025768.1-201ENST00000510057 267 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC110760.3-202ENST00000515177 371 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 OR4A6P-201ENST00000534364 970 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 SLC25A51P2-201ENST00000535708 889 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 NDUFA3P4-201ENST00000560814 250 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 AL589765.5-201ENST00000596133 515 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 BNIP3P31-201ENST00000604515 566 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC009237.12-201ENST00000604755 742 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC016957.2-201ENST00000616998 848 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC078909.2-201ENST00000620584 398 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC073488.7-201ENST00000633785 778 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC011504.1-201ENST00000623331 4103 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SNX18Q96RF0 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.34□□□□□ -1.4
SNX18Q96RF0 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.34□□□□□ -1.4
SNX18Q96RF0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SNX18Q96RF0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 OLMALINC-203ENST00000641087 3779 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 ASNSP6-201ENST00000592770 1618 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC068769.1-201ENST00000474767 2426 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 RNA5SP172-201ENST00000365061 118 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 MIR27A-201ENST00000385073 78 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 TRAV35-201ENST00000390462 330 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 RN7SKP254-201ENST00000410685 310 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 AL645638.1-201ENST00000440519 361 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC009237.4-201ENST00000441078 238 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 THAP12P8-201ENST00000447914 2115 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 C1DP3-201ENST00000455013 423 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 TUBBP11-201ENST00000472255 252 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 TPT1P8-201ENST00000510120 555 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC068790.1-201ENST00000536166 355 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 NF1P12-201ENST00000549593 583 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC023080.1-201ENST00000551663 931 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 SNORA70D-201ENST00000578836 135 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 AC009269.6-201ENST00000621778 588 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 DDX43P1-201ENST00000510713 1763 ntBASIC6.33□□□□□ -1.4
SNX18Q96RF0 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms