Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MIR6823-201ENST00000622118 61 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC074141.1-201ENST00000588129 2995 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 FO082842.1-201ENST00000423552 1370 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 VN2R1P-201ENST00000449668 1743 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 RN7SKP146-201ENST00000410242 334 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 RN7SKP221-201ENST00000410420 301 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AC083862.1-201ENST00000427378 1242 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 KF459542.1-201ENST00000450908 553 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 SUMO2P10-201ENST00000452006 288 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 RBMY2HP-201ENST00000457961 720 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 RN7SL836P-201ENST00000476140 296 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 MTND6P8-201ENST00000503471 522 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 MIR5095-201ENST00000578844 88 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AL445647.2-201ENST00000615170 130 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AC048341.3-201ENST00000619323 491 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 AC005702.3-201ENST00000585345 1447 ntBASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C9orf40Q8IXQ3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 AL359195.2-201ENST00000623657 4412 ntBASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 MIR191-201ENST00000384873 92 ntBASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 RN7SKP38-201ENST00000410782 309 ntBASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.05□□□□□ -1.44
C9orf40Q8IXQ3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms