Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC4.51□□□□□ -1.69
RPL39P62891 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.51□□□□□ -1.69
RPL39P62891 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC4.51□□□□□ -1.69
RPL39P62891 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC4.51□□□□□ -1.69
RPL39P62891 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC4.51□□□□□ -1.69
RPL39P62891 RN7SL390P-201ENST00000470634 284 ntBASIC4.51□□□□□ -1.69
RPL39P62891 RPL5P12-201ENST00000477071 851 ntBASIC4.51□□□□□ -1.69
RPL39P62891 AL135933.1-201ENST00000498657 802 ntBASIC4.51□□□□□ -1.69
RPL39P62891 TECRP2-201ENST00000503270 928 ntBASIC4.51□□□□□ -1.69
RPL39P62891 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC4.51□□□□□ -1.69
RPL39P62891 OR52H2P-201ENST00000514607 902 ntBASIC4.51□□□□□ -1.69
RPL39P62891 AC008429.2-201ENST00000523057 864 ntBASIC4.51□□□□□ -1.69
RPL39P62891 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC4.51□□□□□ -1.69
RPL39P62891 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC4.51□□□□□ -1.69
RPL39P62891 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC4.51□□□□□ -1.69
RPL39P62891 NDUFA3P2-201ENST00000531434 232 ntBASIC4.51□□□□□ -1.69
RPL39P62891 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC4.51□□□□□ -1.69
RPL39P62891 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC4.51□□□□□ -1.69
RPL39P62891 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC4.51□□□□□ -1.69
RPL39P62891 MIR4428-201ENST00000584884 73 ntBASIC4.51□□□□□ -1.69
RPL39P62891 AC005495.1-201ENST00000586611 1211 ntBASIC4.51□□□□□ -1.69
RPL39P62891 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.51□□□□□ -1.69
RPL39P62891 AC133485.6-201ENST00000624045 688 ntBASIC4.51□□□□□ -1.69
RPL39P62891 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 AL121768.1-201ENST00000613917 2544 ntBASIC4.51□□□□□ -1.69
RPL39P62891 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.51□□□□□ -1.69
RPL39P62891 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.5□□□□□ -1.69
RPL39P62891 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RPL39P62891 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
RPL39P62891 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC4.5□□□□□ -1.69
RPL39P62891 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
RPL39P62891 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC4.5□□□□□ -1.69
RPL39P62891 AC011455.2-201ENST00000599320 3336 ntBASIC4.5□□□□□ -1.69
RPL39P62891 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
RPL39P62891 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 RNU12-2P-201ENST00000364789 156 ntBASIC4.5□□□□□ -1.69
RPL39P62891 GNG5P2-201ENST00000372054 207 ntBASIC4.5□□□□□ -1.69
RPL39P62891 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RPL39P62891 RNA5SP176-201ENST00000390956 110 ntBASIC4.5□□□□□ -1.69
RPL39P62891 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.5□□□□□ -1.69
RPL39P62891 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC4.5□□□□□ -1.69
RPL39P62891 RPS10P21-201ENST00000430654 475 ntBASIC4.5□□□□□ -1.69
RPL39P62891 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.5□□□□□ -1.69
RPL39P62891 OR7E7P-201ENST00000455678 1012 ntBASIC4.5□□□□□ -1.69
RPL39P62891 AL445687.2-201ENST00000458156 728 ntBASIC4.5□□□□□ -1.69
RPL39P62891 AC079193.1-201ENST00000460497 588 ntBASIC4.5□□□□□ -1.69
RPL39P62891 NDUFB4P1-201ENST00000462398 381 ntBASIC4.5□□□□□ -1.69
RPL39P62891 AC114728.1-201ENST00000488289 483 ntBASIC4.5□□□□□ -1.69
RPL39P62891 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC4.5□□□□□ -1.69
RPL39P62891 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.5□□□□□ -1.69
RPL39P62891 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC4.5□□□□□ -1.69
RPL39P62891 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.5□□□□□ -1.69
RPL39P62891 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC4.5□□□□□ -1.69
RPL39P62891 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.5□□□□□ -1.69
RPL39P62891 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.5□□□□□ -1.69
RPL39P62891 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC4.5□□□□□ -1.69
RPL39P62891 CASC11-203ENST00000519071 791 ntTSL 3 BASIC4.5□□□□□ -1.69
RPL39P62891 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.5□□□□□ -1.69
RPL39P62891 AP001646.2-201ENST00000528645 1156 ntBASIC4.5□□□□□ -1.69
RPL39P62891 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.5□□□□□ -1.69
RPL39P62891 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 HNRNPCP1-201ENST00000556181 766 ntBASIC4.5□□□□□ -1.69
RPL39P62891 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.5□□□□□ -1.69
RPL39P62891 AL132640.1-201ENST00000559594 619 ntBASIC4.5□□□□□ -1.69
RPL39P62891 FRG2IP-201ENST00000563581 781 ntBASIC4.5□□□□□ -1.69
RPL39P62891 MIR4420-201ENST00000583944 77 ntBASIC4.5□□□□□ -1.69
RPL39P62891 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.5□□□□□ -1.69
RPL39P62891 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RPL39P62891 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms