Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC087272.1-201ENST00000523624 533 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 OR4A13P-201ENST00000529316 942 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC091133.5-201ENST00000603088 301 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 RPS4XP21-201ENST00000603814 750 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 AL359704.2-201ENST00000604335 521 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 AC139493.1-201ENST00000604368 397 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 AC005393.1-201ENST00000617916 584 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.05□□□□□ -1.44
APOBEC1P41238 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
APOBEC1P41238 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.05□□□□□ -1.44
APOBEC1P41238 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
APOBEC1P41238 MTCO1P22-201ENST00000604619 1360 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
APOBEC1P41238 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOBEC1P41238 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC122713.2-201ENST00000624942 3335 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC025809.2-201ENST00000625085 1802 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 AC074141.1-201ENST00000588129 2995 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
APOBEC1P41238 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.04□□□□□ -1.44
APOBEC1P41238 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.04□□□□□ -1.44
APOBEC1P41238 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
APOBEC1P41238 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
APOBEC1P41238 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOBEC1P41238 OR2M1P-201ENST00000318104 951 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 RNU4-23P-201ENST00000362839 140 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 RNA5SP442-201ENST00000365050 107 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.04□□□□□ -1.44
APOBEC1P41238 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.04□□□□□ -1.44
APOBEC1P41238 NPM1P48-201ENST00000436002 853 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.04□□□□□ -1.44
APOBEC1P41238 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.04□□□□□ -1.44
APOBEC1P41238 OR52H2P-201ENST00000514607 902 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.04□□□□□ -1.44
APOBEC1P41238 HNRNPRP2-201ENST00000528421 743 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 AP002004.1-206ENST00000532441 876 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AL109628.1-201ENST00000556877 366 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 AC135626.1-201ENST00000556983 435 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.04□□□□□ -1.44
APOBEC1P41238 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC009303.3-201ENST00000591103 736 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.04□□□□□ -1.44
APOBEC1P41238 BNIP3P7-201ENST00000605641 516 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 SNORA35B-201ENST00000607417 129 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 MIR6070-201ENST00000613967 103 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 MIR6883-201ENST00000614952 78 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 AL118508.4-201ENST00000624142 1176 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 MTCO1P1-201ENST00000624263 1081 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 AL035425.4-201ENST00000624509 1063 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AL596275.2-208ENST00000641192 594 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 CCDC150P1-201ENST00000537123 2215 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOBEC1P41238 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOBEC1P41238 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOBEC1P41238 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOBEC1P41238 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.04□□□□□ -1.44
APOBEC1P41238 AC007406.5-201ENST00000570140 3170 ntBASIC6.04□□□□□ -1.44
APOBEC1P41238 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
APOBEC1P41238 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
APOBEC1P41238 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOBEC1P41238 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOBEC1P41238 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOBEC1P41238 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOBEC1P41238 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.03□□□□□ -1.44
APOBEC1P41238 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.03□□□□□ -1.44
APOBEC1P41238 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.03□□□□□ -1.44
APOBEC1P41238 AC022613.3-201ENST00000560740 1346 ntBASIC6.03□□□□□ -1.44
APOBEC1P41238 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
APOBEC1P41238 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOBEC1P41238 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
APOBEC1P41238 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.03□□□□□ -1.44
APOBEC1P41238 RBPJP6-201ENST00000411556 1431 ntBASIC6.03□□□□□ -1.44
APOBEC1P41238 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOBEC1P41238 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
APOBEC1P41238 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms