Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX4O60224 OR5F2P-201ENST00000532761 941 ntBASIC6.12□□□□□ -1.43
SSX4O60224 CCDC150P1-201ENST00000537123 2215 ntBASIC6.12□□□□□ -1.43
SSX4O60224 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX4O60224 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 AL031846.1-201ENST00000560933 314 ntBASIC6.12□□□□□ -1.43
SSX4O60224 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX4O60224 AC093524.1-201ENST00000564266 1094 ntBASIC6.12□□□□□ -1.43
SSX4O60224 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.12□□□□□ -1.43
SSX4O60224 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX4O60224 RN7SL66P-201ENST00000582099 264 ntBASIC6.12□□□□□ -1.43
SSX4O60224 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX4O60224 AC097376.1-201ENST00000602907 997 ntBASIC6.12□□□□□ -1.43
SSX4O60224 AC092032.1-201ENST00000603090 165 ntBASIC6.12□□□□□ -1.43
SSX4O60224 AL355333.1-201ENST00000605632 279 ntBASIC6.12□□□□□ -1.43
SSX4O60224 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 AC005753.1-201ENST00000623837 618 ntBASIC6.12□□□□□ -1.43
SSX4O60224 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX4O60224 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
SSX4O60224 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX4O60224 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
SSX4O60224 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SSX4O60224 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX4O60224 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.11□□□□□ -1.43
SSX4O60224 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSX4O60224 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX4O60224 AC010168.2-201ENST00000562691 5428 ntBASIC6.11□□□□□ -1.43
SSX4O60224 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX4O60224 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSX4O60224 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
SSX4O60224 RNA5SP53-201ENST00000391299 120 ntBASIC6.11□□□□□ -1.43
SSX4O60224 RNA5SP280-201ENST00000411230 115 ntBASIC6.11□□□□□ -1.43
SSX4O60224 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.11□□□□□ -1.43
SSX4O60224 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX4O60224 TRGV7-201ENST00000427089 353 ntBASIC6.11□□□□□ -1.43
SSX4O60224 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX4O60224 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX4O60224 AC114402.2-201ENST00000432760 643 ntBASIC6.11□□□□□ -1.43
SSX4O60224 CHCHD4P5-201ENST00000436684 427 ntBASIC6.11□□□□□ -1.43
SSX4O60224 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX4O60224 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 AC022080.2-201ENST00000452932 533 ntBASIC6.11□□□□□ -1.43
SSX4O60224 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SSX4O60224 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.11□□□□□ -1.43
SSX4O60224 AC092349.1-201ENST00000504903 310 ntBASIC6.11□□□□□ -1.43
SSX4O60224 IGLV1-62-201ENST00000518003 441 ntBASIC6.11□□□□□ -1.43
SSX4O60224 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX4O60224 OR4A13P-201ENST00000529316 942 ntBASIC6.11□□□□□ -1.43
SSX4O60224 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX4O60224 SNORA70D-201ENST00000578836 135 ntBASIC6.11□□□□□ -1.43
SSX4O60224 MIR5682-201ENST00000584864 76 ntBASIC6.11□□□□□ -1.43
SSX4O60224 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX4O60224 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX4O60224 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX4O60224 AC016542.3-201ENST00000623520 619 ntBASIC6.11□□□□□ -1.43
SSX4O60224 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX4O60224 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX4O60224 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX4O60224 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX4O60224 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSX4O60224 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SSX4O60224 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX4O60224 AC010401.2-201ENST00000575137 4934 ntBASIC6.11□□□□□ -1.43
SSX4O60224 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX4O60224 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SSX4O60224 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX4O60224 OR2A3P-202ENST00000641249 1776 ntBASIC6.11□□□□□ -1.43
SSX4O60224 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX4O60224 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 HSPD1P8-201ENST00000400121 1658 ntBASIC6.1□□□□□ -1.43
SSX4O60224 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.1□□□□□ -1.43
SSX4O60224 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX4O60224 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX4O60224 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 Z95114.1-201ENST00000624264 14574 ntBASIC6.1□□□□□ -1.43
SSX4O60224 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SSX4O60224 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms