Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AC012175.1-201ENST00000603755 531 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AC019257.2-201ENST00000605539 497 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 MIR6780B-201ENST00000610307 79 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 WBP11P1-201ENST00000562560 1931 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 ABCA11P-202ENST00000504019 2110 ntBASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 RNA5SP512-201ENST00000364550 120 ntBASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 AL663061.1-201ENST00000416625 580 ntBASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 AC245291.3-201ENST00000443400 292 ntBASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 AC098818.1-201ENST00000478593 252 ntBASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 AL390198.2-201ENST00000510553 222 ntBASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 AL035425.4-201ENST00000624509 1063 ntBASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 AP005139.1-201ENST00000580702 1647 ntBASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 AC004014.2-201ENST00000623718 5122 ntBASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CLIP2Q9UDT6 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 AC096992.2-201ENST00000609553 1684 ntBASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 AC063923.1-201ENST00000478982 1619 ntBASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 Z97989.1-201ENST00000531702 2421 ntBASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 PPIAP24-201ENST00000328558 471 ntBASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 RPS7P10-201ENST00000464254 603 ntBASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 AL117692.1-201ENST00000494283 713 ntBASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 OR52H2P-201ENST00000514607 902 ntBASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 WBP1LP11-201ENST00000586141 328 ntBASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 AC009779.8-202ENST00000607990 932 ntBASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 AC004241.2-201ENST00000614562 444 ntBASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.86□□□□□ -1.15
CLIP2Q9UDT6 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC093829.1-201ENST00000506662 1618 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms