Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.38□□□□□ -1.23
PPARGC1AQ9UBK2 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PPARGC1AQ9UBK2 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.38□□□□□ -1.23
PPARGC1AQ9UBK2 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PPARGC1AQ9UBK2 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
PPARGC1AQ9UBK2 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
PPARGC1AQ9UBK2 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
PPARGC1AQ9UBK2 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC007938.1-201ENST00000562524 2902 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC023886.2-201ENST00000321285 411 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 RPL10P16-201ENST00000325000 645 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 RN7SKP117-201ENST00000410175 264 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 MTND4LP21-201ENST00000415303 295 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 NPM1P36-201ENST00000415681 835 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 ZNF736P7Y-201ENST00000425158 820 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC245047.1-201ENST00000433276 873 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 ELOCP11-201ENST00000436690 332 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 ELOCP16-201ENST00000444494 332 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC090543.1-201ENST00000492168 485 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 RNA5SP518-201ENST00000515957 119 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 RN7SKP287-201ENST00000516546 266 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC079866.1-201ENST00000534985 1220 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AGGF1P5-201ENST00000567900 919 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC090286.3-201ENST00000573133 187 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AL133247.2-201ENST00000603236 482 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AL161931.1-201ENST00000612768 246 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC009159.2-201ENST00000617603 606 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AC061975.7-201ENST00000592016 2692 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 CDY7P-201ENST00000429883 1604 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 AL358913.2-201ENST00000553881 1548 ntBASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PPARGC1AQ9UBK2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 OR52B5P-204ENST00000641744 3467 ntBASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 QRSL1P3-201ENST00000552666 1316 ntBASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 RNA5SP472-201ENST00000363868 119 ntBASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 AL353625.1-202ENST00000366273 571 ntBASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 MTND4P13-201ENST00000402078 1023 ntBASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 RN7SKP30-201ENST00000411373 334 ntBASIC7.36□□□□□ -1.23
PPARGC1AQ9UBK2 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms