Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 ARSFP1-201ENST00000398758 477 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 RN7SKP205-201ENST00000410999 307 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC096537.2-201ENST00000413707 714 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 ZNF92P1Y-201ENST00000415010 1191 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC013410.1-201ENST00000436223 1232 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC139713.1-202ENST00000512366 460 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AL132640.1-201ENST00000559594 619 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AL354696.1-201ENST00000614652 497 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AL445647.2-201ENST00000615170 130 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC120057.5-201ENST00000623840 154 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC073857.1-201ENST00000625082 1054 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 DLEU2L-201ENST00000371086 3555 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 CUBNP3-201ENST00000457461 1784 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 ATP5BP1-201ENST00000411980 1574 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 MAPK10-357ENST00000641831 2858 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 RBPJP6-201ENST00000411556 1431 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 RNA5SP152-201ENST00000365184 110 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 RPL36P18-201ENST00000419316 318 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AL354714.5-201ENST00000450131 590 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 YRDCP3-201ENST00000456507 480 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 RN7SL70P-201ENST00000478322 302 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 RN7SL379P-201ENST00000479912 293 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC106800.2-201ENST00000514009 1103 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 MTCYBP44-201ENST00000514835 823 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 RNA5SP318-201ENST00000516352 92 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC135626.1-201ENST00000556983 435 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC023389.2-201ENST00000580031 955 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 SETP3-201ENST00000581726 813 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC245128.3-201ENST00000594721 748 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC010333.3-201ENST00000615100 402 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC095038.1-201ENST00000429248 1591 ntBASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4CQ96CF2 AC034229.2-201ENST00000566945 2508 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms