Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 NPM1P14-201ENST00000343743 866 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 RNA5SP382-201ENST00000363355 112 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 MIR431-201ENST00000385266 114 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AHCYP8-201ENST00000425108 209 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 HSPE1P27-201ENST00000430808 296 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC073648.3-201ENST00000504939 925 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AP004607.5-201ENST00000532034 217 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC244034.2-201ENST00000562504 509 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 RN7SL657P-201ENST00000582431 293 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC067852.5-201ENST00000589299 310 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 BUB1P1-201ENST00000603541 607 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 RPS4XP21-201ENST00000603814 750 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 DIMT1P1-201ENST00000603970 763 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC105148.1-201ENST00000604961 409 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AL021368.1-201ENST00000607490 540 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC027506.1-201ENST00000621395 198 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC062022.1-201ENST00000451026 1684 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AL731556.1-201ENST00000394628 3711 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AL162456.1-201ENST00000634535 2006 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AL512353.3-201ENST00000417517 1326 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 PSMC1P4-201ENST00000515236 1327 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 SNORA38B-201ENST00000363524 131 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC074375.1-201ENST00000372993 192 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 RPL12P23-201ENST00000405880 490 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AL136100.1-201ENST00000407696 330 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 E2F6P1-201ENST00000428850 745 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 Z68868.1-201ENST00000429048 544 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC083855.1-201ENST00000440041 258 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 E2F6P3-201ENST00000441743 743 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 SNRPBP1-201ENST00000443634 282 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 RPS3AP49-201ENST00000472161 790 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC099340.1-201ENST00000475247 599 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC022415.1-202ENST00000486612 523 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 RN7SL37P-201ENST00000490461 307 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 NPM1P27-201ENST00000502784 830 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC122134.1-202ENST00000569111 1201 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 MIR4301-201ENST00000577203 66 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC097467.4-201ENST00000605504 141 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms