Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC010442.1-201ENST00000515583 816 ntBASIC7.03□□□□□ -1.28
HDAC4P56524 IGKV2D-38-201ENST00000518423 240 ntBASIC7.03□□□□□ -1.28
HDAC4P56524 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.03□□□□□ -1.28
HDAC4P56524 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.03□□□□□ -1.28
HDAC4P56524 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.03□□□□□ -1.28
HDAC4P56524 SETP17-201ENST00000534163 817 ntBASIC7.03□□□□□ -1.28
HDAC4P56524 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HDAC4P56524 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC7.03□□□□□ -1.28
HDAC4P56524 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
HDAC4P56524 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.03□□□□□ -1.28
HDAC4P56524 AP005901.4-201ENST00000577336 569 ntBASIC7.03□□□□□ -1.28
HDAC4P56524 AC115989.2-201ENST00000578640 563 ntBASIC7.03□□□□□ -1.28
HDAC4P56524 MIR4312-201ENST00000579909 76 ntBASIC7.03□□□□□ -1.28
HDAC4P56524 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.03□□□□□ -1.28
HDAC4P56524 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.03□□□□□ -1.28
HDAC4P56524 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HDAC4P56524 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HDAC4P56524 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HDAC4P56524 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
HDAC4P56524 TTC41P-205ENST00000551270 3963 ntBASIC7.03□□□□□ -1.28
HDAC4P56524 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HDAC4P56524 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HDAC4P56524 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HDAC4P56524 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.03□□□□□ -1.28
HDAC4P56524 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HDAC4P56524 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.03□□□□□ -1.28
HDAC4P56524 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HDAC4P56524 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
HDAC4P56524 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.02□□□□□ -1.29
HDAC4P56524 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HDAC4P56524 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HDAC4P56524 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HDAC4P56524 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
HDAC4P56524 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.02□□□□□ -1.29
HDAC4P56524 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HDAC4P56524 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HDAC4P56524 SETP22-201ENST00000412243 957 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 AL663061.1-201ENST00000416625 580 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.02□□□□□ -1.29
HDAC4P56524 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.02□□□□□ -1.29
HDAC4P56524 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.02□□□□□ -1.29
HDAC4P56524 AC245452.2-201ENST00000435222 392 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.02□□□□□ -1.29
HDAC4P56524 SLAMF6P1-201ENST00000451067 602 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HDAC4P56524 AC073476.1-201ENST00000452854 407 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HDAC4P56524 AC117395.1-201ENST00000487390 403 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 EIF4E2P2-201ENST00000492033 736 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 AC117500.1-201ENST00000497352 755 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 AC008868.1-201ENST00000509786 737 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.02□□□□□ -1.29
HDAC4P56524 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.02□□□□□ -1.29
HDAC4P56524 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.02□□□□□ -1.29
HDAC4P56524 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.02□□□□□ -1.29
HDAC4P56524 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.02□□□□□ -1.29
HDAC4P56524 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.02□□□□□ -1.29
HDAC4P56524 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.02□□□□□ -1.29
HDAC4P56524 AL137000.1-201ENST00000610528 1244 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.02□□□□□ -1.29
HDAC4P56524 AC061999.1-201ENST00000624454 177 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 AC005858.3-201ENST00000624756 589 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 AC005355.2-201ENST00000625064 484 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.02□□□□□ -1.29
HDAC4P56524 AL354702.2-202ENST00000641481 890 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HDAC4P56524 AL136531.3-201ENST00000624378 3658 ntBASIC7.02□□□□□ -1.29
HDAC4P56524 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HDAC4P56524 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HDAC4P56524 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HDAC4P56524 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
HDAC4P56524 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.02□□□□□ -1.29
HDAC4P56524 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.02□□□□□ -1.29
HDAC4P56524 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.02□□□□□ -1.29
HDAC4P56524 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.29
HDAC4P56524 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.02□□□□□ -1.29
HDAC4P56524 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.02□□□□□ -1.29
HDAC4P56524 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.01□□□□□ -1.29
HDAC4P56524 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 AC062029.1-202ENST00000606164 3651 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.01□□□□□ -1.29
HDAC4P56524 AC007485.2-201ENST00000623493 1667 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 AL590635.1-201ENST00000406314 586 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.01□□□□□ -1.29
HDAC4P56524 MTND4LP17-201ENST00000414607 293 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 AC000089.1-201ENST00000424559 801 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 TPTE2P1-204ENST00000435256 593 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms