Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
APOEP02649 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.97□□□□□ -1.29
APOEP02649 AC010132.4-201ENST00000569883 1368 ntBASIC6.97□□□□□ -1.29
APOEP02649 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.97□□□□□ -1.29
APOEP02649 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
APOEP02649 RNU1-5P-201ENST00000362684 144 ntBASIC6.97□□□□□ -1.29
APOEP02649 RNA5SP321-201ENST00000362722 111 ntBASIC6.97□□□□□ -1.29
APOEP02649 AL359694.1-201ENST00000403247 604 ntBASIC6.97□□□□□ -1.29
APOEP02649 AL713922.1-201ENST00000416477 747 ntBASIC6.97□□□□□ -1.29
APOEP02649 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
APOEP02649 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
APOEP02649 AC245452.2-201ENST00000435222 392 ntBASIC6.97□□□□□ -1.29
APOEP02649 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.97□□□□□ -1.29
APOEP02649 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.97□□□□□ -1.29
APOEP02649 RPL26P30-201ENST00000453533 435 ntBASIC6.97□□□□□ -1.29
APOEP02649 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
APOEP02649 AC099340.1-201ENST00000475247 599 ntBASIC6.97□□□□□ -1.29
APOEP02649 RPS7P11-201ENST00000484240 586 ntBASIC6.97□□□□□ -1.29
APOEP02649 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.97□□□□□ -1.29
APOEP02649 MRPS5P3-201ENST00000515577 166 ntBASIC6.97□□□□□ -1.29
APOEP02649 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
APOEP02649 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.97□□□□□ -1.29
APOEP02649 RACGAP1P-201ENST00000550663 1879 ntBASIC6.97□□□□□ -1.29
APOEP02649 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
APOEP02649 AL445383.1-201ENST00000554689 874 ntBASIC6.97□□□□□ -1.29
APOEP02649 AC004232.1-201ENST00000571388 208 ntBASIC6.97□□□□□ -1.29
APOEP02649 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.97□□□□□ -1.29
APOEP02649 AC012175.1-201ENST00000603755 531 ntBASIC6.97□□□□□ -1.29
APOEP02649 AC005034.3-201ENST00000604845 1747 ntBASIC6.97□□□□□ -1.29
APOEP02649 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.97□□□□□ -1.29
APOEP02649 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.97□□□□□ -1.29
APOEP02649 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.97□□□□□ -1.29
APOEP02649 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.97□□□□□ -1.29
APOEP02649 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.97□□□□□ -1.29
APOEP02649 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.97□□□□□ -1.29
APOEP02649 MIR7854-201ENST00000620068 65 ntBASIC6.97□□□□□ -1.29
APOEP02649 AL138693.1-201ENST00000622219 129 ntBASIC6.97□□□□□ -1.29
APOEP02649 AC112243.1-201ENST00000623949 3851 ntBASIC6.97□□□□□ -1.29
APOEP02649 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
APOEP02649 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
APOEP02649 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.97□□□□□ -1.29
APOEP02649 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.97□□□□□ -1.29
APOEP02649 AC067942.1-201ENST00000488045 1493 ntBASIC6.97□□□□□ -1.29
APOEP02649 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
APOEP02649 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
APOEP02649 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
APOEP02649 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
APOEP02649 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
APOEP02649 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
APOEP02649 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
APOEP02649 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
APOEP02649 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
APOEP02649 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
APOEP02649 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
APOEP02649 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.96□□□□□ -1.29
APOEP02649 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
APOEP02649 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
APOEP02649 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.96□□□□□ -1.3
APOEP02649 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
APOEP02649 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 AC010894.1-201ENST00000313760 361 ntBASIC6.96□□□□□ -1.3
APOEP02649 RPL24P4-201ENST00000326586 421 ntBASIC6.96□□□□□ -1.3
APOEP02649 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 SNORA38B-201ENST00000363524 131 ntBASIC6.96□□□□□ -1.3
APOEP02649 SNORA7A-201ENST00000384765 139 ntBASIC6.96□□□□□ -1.3
APOEP02649 SNORD94-201ENST00000386037 137 ntBASIC6.96□□□□□ -1.3
APOEP02649 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.96□□□□□ -1.3
APOEP02649 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.96□□□□□ -1.3
APOEP02649 RN7SKP296-201ENST00000411185 341 ntBASIC6.96□□□□□ -1.3
APOEP02649 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.96□□□□□ -1.3
APOEP02649 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.96□□□□□ -1.3
APOEP02649 VN1R53P-201ENST00000429536 957 ntBASIC6.96□□□□□ -1.3
APOEP02649 PA2G4P1-201ENST00000442248 1197 ntBASIC6.96□□□□□ -1.3
APOEP02649 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 AL034369.1-201ENST00000453808 477 ntBASIC6.96□□□□□ -1.3
APOEP02649 AC117395.1-201ENST00000487390 403 ntBASIC6.96□□□□□ -1.3
APOEP02649 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.96□□□□□ -1.3
APOEP02649 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.96□□□□□ -1.3
APOEP02649 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.96□□□□□ -1.3
APOEP02649 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.96□□□□□ -1.3
APOEP02649 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.96□□□□□ -1.3
APOEP02649 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.96□□□□□ -1.3
APOEP02649 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.96□□□□□ -1.3
APOEP02649 AC024267.2-201ENST00000582737 417 ntBASIC6.96□□□□□ -1.3
APOEP02649 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.96□□□□□ -1.3
APOEP02649 AC091133.5-201ENST00000603088 301 ntBASIC6.96□□□□□ -1.3
APOEP02649 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.96□□□□□ -1.3
APOEP02649 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.96□□□□□ -1.3
APOEP02649 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 AC061999.1-201ENST00000624454 177 ntBASIC6.96□□□□□ -1.3
APOEP02649 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.96□□□□□ -1.3
APOEP02649 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
APOEP02649 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms