Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SMIM23-201ENST00000330910 468 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RN7SKP37-201ENST00000364494 296 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 UBBP2-201ENST00000376781 231 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RPL11P3-201ENST00000395256 523 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 PPM1N-202ENST00000396736 527 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL133406.1-201ENST00000404904 747 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 MIR1226-201ENST00000408658 75 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RNU2-18P-201ENST00000411224 162 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC009413.1-201ENST00000414823 399 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LYPLA2P3-201ENST00000417429 576 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 SPATA20P1-201ENST00000423089 438 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC009784.1-201ENST00000426484 460 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 FAM136BP-201ENST00000428729 417 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL445189.2-201ENST00000447543 259 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RPS23P9-201ENST00000448848 438 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL139220.2-215ENST00000453688 654 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RPS6P2-201ENST00000454208 705 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RN7SL417P-201ENST00000459938 265 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RFKP2-201ENST00000464555 477 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 TUBBP11-201ENST00000472255 252 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 TUBB3P2-201ENST00000480063 232 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RPL12P8-201ENST00000482081 580 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC008588.1-201ENST00000514867 462 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 FAM83A-AS1-201ENST00000517519 1158 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 IL18-202ENST00000524595 1090 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 OR7E15P-201ENST00000533484 967 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 NXPE2P1-201ENST00000543705 726 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 CRADD-210ENST00000552033 622 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 EEF1B2P1-201ENST00000567221 672 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC100791.1-201ENST00000570408 324 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL157931.1-201ENST00000575845 585 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 MIR3137-201ENST00000577367 75 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 MIR3189-201ENST00000578735 73 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RN7SL270P-201ENST00000579643 281 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC005224.3-201ENST00000584683 2140 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC005954.2-201ENST00000586503 556 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 TSPAN16-205ENST00000592955 927 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 OR7A18P-201ENST00000600416 277 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC099777.1-201ENST00000603779 1070 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL356986.1-201ENST00000604085 341 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL008729.2-201ENST00000606393 473 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC104113.1-201ENST00000607723 479 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL137796.1-201ENST00000608190 577 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 CSH1-206ENST00000610991 580 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RN7SL650P-201ENST00000619902 299 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AP000769.3-201ENST00000622944 536 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01727-202ENST00000623256 1218 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL139254.2-202ENST00000641937 1156 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL031291.1-201ENST00000641979 742 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 SEPT10-205ENST00000415095 1605 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AL513548.1-201ENST00000562904 1724 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms