Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AL662791.1-201ENST00000441992 928 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 CYP4F25P-201ENST00000446871 520 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 RPS3P7-201ENST00000488662 726 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 HMGB1P3-201ENST00000502802 616 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC006499.4-201ENST00000510947 694 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 SNORA20.3-201ENST00000516880 132 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 SNRPCP14-201ENST00000524498 205 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC074029.1-201ENST00000552531 1044 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 MIR5010-201ENST00000582846 120 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 NAMPTP1-201ENST00000440465 2514 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 SAMM50P1-201ENST00000455403 1399 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC110926.1-201ENST00000412499 2825 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC124045.1-201ENST00000606008 1953 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 RNU4-21P-201ENST00000362802 126 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 SNORA63-201ENST00000363450 132 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 RPS20P15-201ENST00000412792 311 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 EEF1A1P40-201ENST00000412883 573 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 EIF4A1P1-201ENST00000420241 934 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 MED14P1-201ENST00000430517 648 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL645936.2-201ENST00000430565 928 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 USP9YP8-201ENST00000441913 500 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 ZNF619P1-201ENST00000446539 752 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL627224.1-201ENST00000448334 444 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 RN7SL218P-201ENST00000464637 299 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 RPS14P7-201ENST00000473701 448 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 DAZAP2P1-201ENST00000475212 503 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 FTH1P4-201ENST00000480365 553 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC008628.2-201ENST00000502605 298 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 RFPL4AP3-201ENST00000515267 345 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 IGKV2D-14-201ENST00000522473 355 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 UBE2NP1-201ENST00000545592 458 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 STXBP6-204ENST00000546511 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms