Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 Z95114.1-201ENST00000624264 14574 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AL449283.1-201ENST00000602631 3403 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 MIR614-201ENST00000385082 90 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 RPS3AP5-201ENST00000389400 821 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC117434.1-201ENST00000419971 836 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 GAPDHP69-201ENST00000425504 1008 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 FTLP17-201ENST00000432567 525 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 CCNJP2-201ENST00000457810 1163 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 CR383656.1-201ENST00000484916 377 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 NIFKP4-201ENST00000567275 1192 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 MIR4786-201ENST00000583954 80 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 COX6CP16-201ENST00000603667 216 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AL356986.1-201ENST00000604085 341 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 LSM1P2-201ENST00000604911 322 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AL031777.2-201ENST00000611953 196 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC026333.4-201ENST00000613543 544 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AL132640.3-201ENST00000630473 177 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC005225.5-201ENST00000623547 2225 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC067942.1-201ENST00000488045 1493 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 AC083837.1-201ENST00000565297 2994 ntBASIC5.49□□□□□ -1.53
CCDC71LQ8N9Z2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 AC004656.1-201ENST00000568479 4951 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 OR10D1P-201ENST00000355343 936 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 RNU4-81P-201ENST00000363561 144 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 AC090114.1-201ENST00000393266 448 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 AL451046.1-201ENST00000406097 534 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 RN7SKP161-201ENST00000411110 305 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 RNA5SP115-201ENST00000411160 107 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 HMGA1P8-201ENST00000414130 321 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 AL157698.1-201ENST00000415190 1011 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 RPSAP59-201ENST00000421048 890 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 OR5W1P-201ENST00000423705 938 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 ZBTB8OSP2-201ENST00000423890 504 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 PPIL1P1-201ENST00000423936 499 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 H3F3BP1-201ENST00000440551 403 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 GAPDHP53-201ENST00000458397 924 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 RPL7P17-201ENST00000470927 724 ntBASIC5.48□□□□□ -1.53
CCDC71LQ8N9Z2 RN7SL815P-201ENST00000470970 290 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms