Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.5□□□□□ -1.53
CX3CL1P78423 TAAR4P-201ENST00000454843 1039 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 OR7E7P-201ENST00000455678 1012 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AC089999.1-201ENST00000460336 374 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AC115223.1-201ENST00000466377 870 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AC126615.1-201ENST00000470084 630 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.5□□□□□ -1.53
CX3CL1P78423 AC135999.1-201ENST00000478962 479 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CL1P78423 RPL23AP68-201ENST00000480924 445 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 RPL7L1P7-201ENST00000509986 724 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AC134698.1-201ENST00000511619 643 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.5□□□□□ -1.53
CX3CL1P78423 SNORA70.17-201ENST00000516449 133 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 IGLC4-201ENST00000517690 248 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 AC103855.4-201ENST00000533158 265 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AC016144.1-201ENST00000548175 1087 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.5□□□□□ -1.53
CX3CL1P78423 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC5.5□□□□□ -1.53
CX3CL1P78423 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.5□□□□□ -1.53
CX3CL1P78423 AC007255.2-201ENST00000604053 631 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CL1P78423 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.5□□□□□ -1.53
CX3CL1P78423 AL121985.3-201ENST00000620690 523 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AC008626.2-201ENST00000624425 248 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CL1P78423 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CL1P78423 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.5□□□□□ -1.53
CX3CL1P78423 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 AC006600.2-201ENST00000624834 2506 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CX3CL1P78423 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
CX3CL1P78423 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.5□□□□□ -1.53
CX3CL1P78423 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CL1P78423 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CL1P78423 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CX3CL1P78423 CDY11P-201ENST00000447168 1651 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CL1P78423 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.49□□□□□ -1.53
CX3CL1P78423 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AC102941.1-201ENST00000567616 1537 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CX3CL1P78423 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CX3CL1P78423 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CL1P78423 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CX3CL1P78423 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CX3CL1P78423 MT-RNR1-201ENST00000389680 954 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 RNU1-56P-201ENST00000391303 164 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CL1P78423 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CL1P78423 RN7SKP271-201ENST00000410528 320 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 RNU6-564P-201ENST00000410983 104 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 RN7SKP137-201ENST00000411074 307 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 PSMC1P2-201ENST00000423961 1204 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 RPS16P9-201ENST00000477220 427 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 RN7SL259P-201ENST00000478499 253 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 RN7SL379P-201ENST00000479912 293 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 RPS10P28-201ENST00000480396 498 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 AC063943.2-201ENST00000495697 534 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 OR9L1P-201ENST00000529493 933 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 OR4A42P-201ENST00000531397 938 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.49□□□□□ -1.53
CX3CL1P78423 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AC090241.1-201ENST00000587732 621 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 AC023206.1-201ENST00000605824 298 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 AC139792.1-201ENST00000607051 647 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 AC007620.3-201ENST00000608131 497 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 AL356752.1-201ENST00000615844 593 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 AC009283.1-201ENST00000615852 645 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms