Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 AL589765.5-201ENST00000596133 515 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 AC244100.4-201ENST00000617747 388 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 AC048341.3-201ENST00000619323 491 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 SNX18P10-201ENST00000625014 519 ntBASIC6.55□□□□□ -1.36
NR1H2P55055 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.55□□□□□ -1.36
NR1H2P55055 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
NR1H2P55055 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
NR1H2P55055 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.54□□□□□ -1.36
NR1H2P55055 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 AC119674.1-202ENST00000641333 1860 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
NR1H2P55055 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NR1H2P55055 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 SNORA2C-201ENST00000408564 137 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 OR52N3P-201ENST00000413417 934 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 AC023141.10-201ENST00000415634 200 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 AC020983.1-201ENST00000417063 543 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 SNX18P3-201ENST00000424993 835 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.54□□□□□ -1.36
NR1H2P55055 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.54□□□□□ -1.36
NR1H2P55055 AC008620.1-201ENST00000468453 592 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 RN7SL88P-201ENST00000480166 299 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 AC122714.1-201ENST00000502510 459 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 RN7SKP67-201ENST00000515905 235 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 AP001804.1-201ENST00000526868 919 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.54□□□□□ -1.36
NR1H2P55055 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.54□□□□□ -1.36
NR1H2P55055 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.54□□□□□ -1.36
NR1H2P55055 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.54□□□□□ -1.36
NR1H2P55055 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.54□□□□□ -1.36
NR1H2P55055 AC091304.4-201ENST00000565703 620 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 RN7SL131P-201ENST00000579043 256 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 AC097381.3-201ENST00000608962 462 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.54□□□□□ -1.36
NR1H2P55055 AC243830.2-201ENST00000618067 630 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 AC093909.6-201ENST00000624757 775 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 AC073488.7-201ENST00000633785 778 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 AC243725.1-201ENST00000637164 436 ntBASIC6.54□□□□□ -1.36
NR1H2P55055 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NR1H2P55055 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NR1H2P55055 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NR1H2P55055 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.54□□□□□ -1.36
NR1H2P55055 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
NR1H2P55055 HSPD1P1-201ENST00000503199 1726 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
NR1H2P55055 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NR1H2P55055 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NR1H2P55055 AL731556.1-201ENST00000394628 3711 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NR1H2P55055 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.53□□□□□ -1.36
NR1H2P55055 AL136116.2-201ENST00000404020 785 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 AL356968.2-201ENST00000412769 1257 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 RPSAP60-201ENST00000415403 880 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.53□□□□□ -1.36
NR1H2P55055 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.53□□□□□ -1.36
NR1H2P55055 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.53□□□□□ -1.36
NR1H2P55055 MTCO1P57-201ENST00000432182 261 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.53□□□□□ -1.36
NR1H2P55055 TREML3P-201ENST00000457327 501 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms