Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SHROOM1Q2M3G4 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.71□□□□□ -1.17
SHROOM1Q2M3G4 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.71□□□□□ -1.17
SHROOM1Q2M3G4 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SHROOM1Q2M3G4 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SHROOM1Q2M3G4 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 RNA5SP65-201ENST00000363166 119 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 RN7SKP15-201ENST00000364742 309 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AL157702.1-201ENST00000398764 426 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 DHFRP2-201ENST00000414224 547 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 OSTCP4-201ENST00000424397 449 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 PSMD10P2-201ENST00000432890 672 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 H3F3AP3-201ENST00000497682 407 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AC011352.2-201ENST00000514574 1016 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 MIR4502-201ENST00000580432 81 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 SYPL1P2-201ENST00000582878 727 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AC124916.2-201ENST00000604416 224 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AC073046.2-201ENST00000604756 527 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AL109924.4-201ENST00000623089 670 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AC119674.1-217ENST00000641942 1086 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AC007993.1-201ENST00000621298 2430 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AC023245.2-201ENST00000530760 2978 ntBASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SHROOM1Q2M3G4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 KCTD9P1-201ENST00000430462 1167 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 IGKV2-4-201ENST00000523070 340 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AC026826.3-201ENST00000561747 158 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AL365223.1-201ENST00000574864 1297 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 RN7SL199P-201ENST00000578752 281 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 RN7SL656P-201ENST00000579044 281 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 RN7SL270P-201ENST00000579643 281 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 MIR4310-201ENST00000582950 57 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 SMIM12P1-201ENST00000603004 274 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AL157899.1-201ENST00000604110 936 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 RPSAP75-201ENST00000605848 301 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AC005277.2-201ENST00000617898 390 ntBASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms