Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 AL117351.1-201ENST00000438864 766 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.37□□□□□ -1.39
CLRN1P58418 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 RN7SL797P-201ENST00000486314 297 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AC020699.1-201ENST00000505161 445 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 SUMO2P5-201ENST00000506790 245 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AC112518.2-201ENST00000508565 425 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.37□□□□□ -1.39
CLRN1P58418 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC6.37□□□□□ -1.39
CLRN1P58418 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.37□□□□□ -1.39
CLRN1P58418 AC010376.1-201ENST00000522101 334 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.37□□□□□ -1.39
CLRN1P58418 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.37□□□□□ -1.39
CLRN1P58418 NOP56P3-201ENST00000549457 385 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.37□□□□□ -1.39
CLRN1P58418 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.37□□□□□ -1.39
CLRN1P58418 AL365223.1-201ENST00000574864 1297 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AF186192.2-204ENST00000581667 524 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.37□□□□□ -1.39
CLRN1P58418 AC234772.3-201ENST00000602277 528 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 RPP40P2-201ENST00000603596 712 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AC004839.1-201ENST00000610269 501 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 RNU6-1192P-201ENST00000612197 107 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AC079395.3-201ENST00000615161 484 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 CXADRP3-202ENST00000617265 1100 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 RNU6-489P-201ENST00000618289 107 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.37□□□□□ -1.39
CLRN1P58418 AC021422.1-201ENST00000621212 473 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.37□□□□□ -1.39
CLRN1P58418 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.37□□□□□ -1.39
CLRN1P58418 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CLRN1P58418 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.37□□□□□ -1.39
CLRN1P58418 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.37□□□□□ -1.39
CLRN1P58418 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.37□□□□□ -1.39
CLRN1P58418 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.37□□□□□ -1.39
CLRN1P58418 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 EPS15P1-202ENST00000459691 2071 ntBASIC6.37□□□□□ -1.39
CLRN1P58418 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CLRN1P58418 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLRN1P58418 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CLRN1P58418 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 CDY7P-201ENST00000429883 1604 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 MFSD8-256ENST00000641949 1640 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 AL358913.2-201ENST00000553881 1548 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.36□□□□□ -1.39
CLRN1P58418 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CLRN1P58418 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CLRN1P58418 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.36□□□□□ -1.39
CLRN1P58418 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
CLRN1P58418 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
CLRN1P58418 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.36□□□□□ -1.39
CLRN1P58418 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.36□□□□□ -1.39
CLRN1P58418 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CLRN1P58418 RMRPP5-201ENST00000411156 267 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 AL606495.1-201ENST00000422100 813 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 RBMY2JP-201ENST00000425544 1059 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 MORF4L1P5-201ENST00000433352 961 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.36□□□□□ -1.39
CLRN1P58418 RNFT1P2-201ENST00000443064 757 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 AL139135.2-201ENST00000445040 433 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.36□□□□□ -1.39
CLRN1P58418 AC002486.2-201ENST00000447806 590 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 EXOSC3P1-201ENST00000448649 500 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.36□□□□□ -1.39
CLRN1P58418 RPSAP7-201ENST00000456871 885 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 AC021074.2-201ENST00000468434 172 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 AC015864.1-201ENST00000496512 544 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.36□□□□□ -1.39
CLRN1P58418 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 AC016559.1-201ENST00000511420 199 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms