Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.07□□□□□ -1.28
HDAC4P56524 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.07□□□□□ -1.28
HDAC4P56524 OR1N1-202ENST00000619659 939 ntBASIC7.07□□□□□ -1.28
HDAC4P56524 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.07□□□□□ -1.28
HDAC4P56524 AC010168.2-201ENST00000562691 5428 ntBASIC7.07□□□□□ -1.28
HDAC4P56524 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HDAC4P56524 BX284613.1-201ENST00000452221 1641 ntBASIC7.07□□□□□ -1.28
HDAC4P56524 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HDAC4P56524 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HDAC4P56524 PABPC1P8-201ENST00000452851 2086 ntBASIC7.07□□□□□ -1.28
HDAC4P56524 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HDAC4P56524 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HDAC4P56524 AC105114.1-201ENST00000624795 1862 ntBASIC7.07□□□□□ -1.28
HDAC4P56524 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.06□□□□□ -1.28
HDAC4P56524 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HDAC4P56524 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
HDAC4P56524 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HDAC4P56524 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.06□□□□□ -1.28
HDAC4P56524 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.06□□□□□ -1.28
HDAC4P56524 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HDAC4P56524 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HDAC4P56524 ZNF806-201ENST00000438300 1774 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HDAC4P56524 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HDAC4P56524 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HDAC4P56524 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HDAC4P56524 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HDAC4P56524 RNA5SP152-201ENST00000365184 110 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.06□□□□□ -1.28
HDAC4P56524 LDHAP5-201ENST00000394996 622 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 CYCSP17-201ENST00000407870 315 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.06□□□□□ -1.28
HDAC4P56524 RN7SKP91-201ENST00000410852 288 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.06□□□□□ -1.28
HDAC4P56524 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.06□□□□□ -1.28
HDAC4P56524 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.06□□□□□ -1.28
HDAC4P56524 AK3P5-201ENST00000432033 519 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.06□□□□□ -1.28
HDAC4P56524 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 OR52E7P-201ENST00000452394 933 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 AL354872.1-201ENST00000456361 967 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 RN7SL216P-201ENST00000471607 298 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.06□□□□□ -1.28
HDAC4P56524 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC7.06□□□□□ -1.28
HDAC4P56524 AC114940.1-201ENST00000512162 1265 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.06□□□□□ -1.28
HDAC4P56524 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HDAC4P56524 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.06□□□□□ -1.28
HDAC4P56524 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.06□□□□□ -1.28
HDAC4P56524 AC092375.1-201ENST00000550410 637 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.06□□□□□ -1.28
HDAC4P56524 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.06□□□□□ -1.28
HDAC4P56524 AC004232.1-201ENST00000571388 208 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 AC100832.2-201ENST00000582080 776 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 AC015818.6-201ENST00000584274 634 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.06□□□□□ -1.28
HDAC4P56524 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.06□□□□□ -1.28
HDAC4P56524 MRPL57P3-201ENST00000619218 176 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 AL354718.1-201ENST00000619764 589 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
HDAC4P56524 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HDAC4P56524 AC095038.1-201ENST00000429248 1591 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 CDY10P-201ENST00000452415 1567 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HDAC4P56524 HSPD1P1-201ENST00000503199 1726 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 AC005034.3-201ENST00000604845 1747 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HDAC4P56524 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
HDAC4P56524 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.06□□□□□ -1.28
HDAC4P56524 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
HDAC4P56524 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HDAC4P56524 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HDAC4P56524 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
HDAC4P56524 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.05□□□□□ -1.28
HDAC4P56524 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC7.05□□□□□ -1.28
HDAC4P56524 AL596244.1-201ENST00000567068 3779 ntBASIC7.05□□□□□ -1.28
HDAC4P56524 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
HDAC4P56524 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HDAC4P56524 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HDAC4P56524 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HDAC4P56524 RN7SKP130-201ENST00000364924 301 ntBASIC7.05□□□□□ -1.28
HDAC4P56524 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.05□□□□□ -1.28
HDAC4P56524 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HDAC4P56524 RPL7P58-201ENST00000402913 758 ntBASIC7.05□□□□□ -1.28
HDAC4P56524 RNU4-64P-201ENST00000410795 131 ntBASIC7.05□□□□□ -1.28
HDAC4P56524 NPM1P25-201ENST00000429734 854 ntBASIC7.05□□□□□ -1.28
HDAC4P56524 KATNBL1P2-201ENST00000433311 835 ntBASIC7.05□□□□□ -1.28
HDAC4P56524 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HDAC4P56524 AL845321.1-201ENST00000444603 348 ntBASIC7.05□□□□□ -1.28
HDAC4P56524 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.05□□□□□ -1.28
HDAC4P56524 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.05□□□□□ -1.28
HDAC4P56524 BZW1P1-201ENST00000454901 1240 ntBASIC7.05□□□□□ -1.28
HDAC4P56524 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC7.05□□□□□ -1.28
HDAC4P56524 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HDAC4P56524 MTCO1P55-201ENST00000489829 745 ntBASIC7.05□□□□□ -1.28
HDAC4P56524 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.05□□□□□ -1.28
HDAC4P56524 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HDAC4P56524 AC091917.2-201ENST00000505002 744 ntBASIC7.05□□□□□ -1.28
HDAC4P56524 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
HDAC4P56524 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms