Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.96□□□□□ -1.3
PTPN9P43378 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PTPN9P43378 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
PTPN9P43378 RNA5SP355-201ENST00000365317 135 ntBASIC6.96□□□□□ -1.3
PTPN9P43378 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.96□□□□□ -1.3
PTPN9P43378 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
PTPN9P43378 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PTPN9P43378 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PTPN9P43378 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.96□□□□□ -1.3
PTPN9P43378 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.96□□□□□ -1.3
PTPN9P43378 AC017035.1-201ENST00000411999 1115 ntBASIC6.96□□□□□ -1.3
PTPN9P43378 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.96□□□□□ -1.3
PTPN9P43378 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.96□□□□□ -1.3
PTPN9P43378 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.96□□□□□ -1.3
PTPN9P43378 VN1R96P-201ENST00000446052 858 ntBASIC6.96□□□□□ -1.3
PTPN9P43378 AC099340.1-201ENST00000475247 599 ntBASIC6.96□□□□□ -1.3
PTPN9P43378 AL079303.1-201ENST00000486611 463 ntBASIC6.96□□□□□ -1.3
PTPN9P43378 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
PTPN9P43378 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.96□□□□□ -1.3
PTPN9P43378 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.96□□□□□ -1.3
PTPN9P43378 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.96□□□□□ -1.3
PTPN9P43378 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.96□□□□□ -1.3
PTPN9P43378 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.96□□□□□ -1.3
PTPN9P43378 AL953862.2-201ENST00000603089 820 ntBASIC6.96□□□□□ -1.3
PTPN9P43378 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.96□□□□□ -1.3
PTPN9P43378 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.96□□□□□ -1.3
PTPN9P43378 AC127071.2-201ENST00000623293 527 ntBASIC6.96□□□□□ -1.3
PTPN9P43378 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
PTPN9P43378 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PTPN9P43378 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
PTPN9P43378 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PTPN9P43378 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
PTPN9P43378 AC025809.2-201ENST00000625085 1802 ntBASIC6.96□□□□□ -1.3
PTPN9P43378 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
PTPN9P43378 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PTPN9P43378 AL136531.3-201ENST00000624378 3658 ntBASIC6.96□□□□□ -1.3
PTPN9P43378 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
PTPN9P43378 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.96□□□□□ -1.3
PTPN9P43378 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PTPN9P43378 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.95□□□□□ -1.3
PTPN9P43378 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC089998.1-201ENST00000548575 3141 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PTPN9P43378 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.95□□□□□ -1.3
PTPN9P43378 SPATA20P1-201ENST00000423089 438 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 PTPN2P1-201ENST00000423212 1072 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC022080.2-201ENST00000452932 533 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.95□□□□□ -1.3
PTPN9P43378 RPS3AP49-201ENST00000472161 790 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC018639.1-201ENST00000492994 442 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC096754.1-201ENST00000508904 818 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.95□□□□□ -1.3
PTPN9P43378 RN7SKP98-201ENST00000517070 156 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.95□□□□□ -1.3
PTPN9P43378 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.95□□□□□ -1.3
PTPN9P43378 MIR3159-201ENST00000584572 74 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.95□□□□□ -1.3
PTPN9P43378 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.95□□□□□ -1.3
PTPN9P43378 AC018692.2-201ENST00000624130 348 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 MKI67P1-201ENST00000604297 1460 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
PTPN9P43378 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
PTPN9P43378 MTCO1P8-201ENST00000416914 1523 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PTPN9P43378 PSMC1P6-201ENST00000477233 1319 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.95□□□□□ -1.3
PTPN9P43378 AL021877.2-201ENST00000624442 10684 ntBASIC6.95□□□□□ -1.3
PTPN9P43378 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PTPN9P43378 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.94□□□□□ -1.3
PTPN9P43378 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
PTPN9P43378 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.94□□□□□ -1.3
PTPN9P43378 CYP2G2P-201ENST00000594920 1485 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms