Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.07□□□□□ -1.44
ZIC3O60481 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.07□□□□□ -1.44
ZIC3O60481 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.07□□□□□ -1.44
ZIC3O60481 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.07□□□□□ -1.44
ZIC3O60481 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
ZIC3O60481 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.07□□□□□ -1.44
ZIC3O60481 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
ZIC3O60481 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 AC089998.1-201ENST00000548575 3141 ntBASIC6.07□□□□□ -1.44
ZIC3O60481 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
ZIC3O60481 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZIC3O60481 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.06□□□□□ -1.44
ZIC3O60481 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.06□□□□□ -1.44
ZIC3O60481 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
ZIC3O60481 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ZIC3O60481 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ZIC3O60481 OR7A2P-201ENST00000304105 930 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 SNORA7A-201ENST00000384765 139 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 MIR551B-201ENST00000384984 96 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 AL136116.2-201ENST00000404020 785 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 RPL12P23-201ENST00000405880 490 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.06□□□□□ -1.44
ZIC3O60481 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.06□□□□□ -1.44
ZIC3O60481 RPS7P12-201ENST00000422385 582 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.06□□□□□ -1.44
ZIC3O60481 VN1R53P-201ENST00000429536 957 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 AC245452.2-201ENST00000435222 392 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.06□□□□□ -1.44
ZIC3O60481 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.06□□□□□ -1.44
ZIC3O60481 AL500527.1-201ENST00000448532 255 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.06□□□□□ -1.44
ZIC3O60481 AL034369.1-201ENST00000453808 477 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 TPRKBP1-201ENST00000456243 481 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.06□□□□□ -1.44
ZIC3O60481 RN7SL612P-201ENST00000497704 295 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ZIC3O60481 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.06□□□□□ -1.44
ZIC3O60481 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.06□□□□□ -1.44
ZIC3O60481 AC106800.2-201ENST00000514009 1103 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.06□□□□□ -1.44
ZIC3O60481 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.06□□□□□ -1.44
ZIC3O60481 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.06□□□□□ -1.44
ZIC3O60481 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 AC092375.1-201ENST00000550410 637 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.06□□□□□ -1.44
ZIC3O60481 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.06□□□□□ -1.44
ZIC3O60481 TMF1P1-201ENST00000576058 373 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.06□□□□□ -1.44
ZIC3O60481 RN7SL270P-201ENST00000579643 281 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.06□□□□□ -1.44
ZIC3O60481 AC245052.7-201ENST00000601161 359 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 AC016590.3-201ENST00000611171 753 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 HTR1DP1-201ENST00000616500 888 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 AL035425.4-201ENST00000624509 1063 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.06□□□□□ -1.44
ZIC3O60481 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.06□□□□□ -1.44
ZIC3O60481 AP001157.1-201ENST00000550837 2339 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ZIC3O60481 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.06□□□□□ -1.44
ZIC3O60481 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.06□□□□□ -1.44
ZIC3O60481 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.06□□□□□ -1.44
ZIC3O60481 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.06□□□□□ -1.44
ZIC3O60481 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.06□□□□□ -1.44
ZIC3O60481 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZIC3O60481 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
ZIC3O60481 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms