Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL121809.2-201ENST00000613169 341 ntBASIC6.17□□□□□ -1.42
SSX4O60224 AC021422.1-201ENST00000621212 473 ntBASIC6.17□□□□□ -1.42
SSX4O60224 AC022743.1-201ENST00000624990 664 ntBASIC6.17□□□□□ -1.42
SSX4O60224 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX4O60224 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX4O60224 AL356585.10-201ENST00000641883 123 ntBASIC6.17□□□□□ -1.42
SSX4O60224 OR7E161P-202ENST00000641994 1033 ntBASIC6.17□□□□□ -1.42
SSX4O60224 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX4O60224 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SSX4O60224 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX4O60224 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX4O60224 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX4O60224 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 AC090774.4-201ENST00000578888 1372 ntBASIC6.17□□□□□ -1.42
SSX4O60224 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 AC093297.3-201ENST00000607056 2517 ntBASIC6.17□□□□□ -1.42
SSX4O60224 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SSX4O60224 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 WNK1-220ENST00000574564 1401 ntBASIC6.16□□□□□ -1.42
SSX4O60224 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SSX4O60224 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 AC013488.1-201ENST00000526618 1838 ntBASIC6.16□□□□□ -1.42
SSX4O60224 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SSX4O60224 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX4O60224 RPL9P21-201ENST00000392269 505 ntBASIC6.16□□□□□ -1.42
SSX4O60224 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SSX4O60224 AL034417.1-201ENST00000399343 800 ntBASIC6.16□□□□□ -1.42
SSX4O60224 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX4O60224 CASKP1-201ENST00000412870 582 ntBASIC6.16□□□□□ -1.42
SSX4O60224 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX4O60224 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.16□□□□□ -1.42
SSX4O60224 AC073900.1-201ENST00000429766 776 ntBASIC6.16□□□□□ -1.42
SSX4O60224 NPM1P48-201ENST00000436002 853 ntBASIC6.16□□□□□ -1.42
SSX4O60224 PSMD8P1-201ENST00000436275 769 ntBASIC6.16□□□□□ -1.42
SSX4O60224 HMGN1P6-201ENST00000438508 291 ntBASIC6.16□□□□□ -1.42
SSX4O60224 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX4O60224 AL034399.1-201ENST00000451535 380 ntBASIC6.16□□□□□ -1.42
SSX4O60224 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.16□□□□□ -1.42
SSX4O60224 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.16□□□□□ -1.42
SSX4O60224 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX4O60224 RN7SL149P-201ENST00000465197 281 ntBASIC6.16□□□□□ -1.42
SSX4O60224 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 RN7SL392P-201ENST00000473024 299 ntBASIC6.16□□□□□ -1.42
SSX4O60224 RPS4XP17-201ENST00000479057 754 ntBASIC6.16□□□□□ -1.42
SSX4O60224 AC008496.1-201ENST00000509131 295 ntBASIC6.16□□□□□ -1.42
SSX4O60224 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX4O60224 RNA5SP518-201ENST00000515957 119 ntBASIC6.16□□□□□ -1.42
SSX4O60224 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX4O60224 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX4O60224 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX4O60224 AC015801.1-201ENST00000585651 153 ntBASIC6.16□□□□□ -1.42
SSX4O60224 RPSAP66-201ENST00000592196 606 ntBASIC6.16□□□□□ -1.42
SSX4O60224 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX4O60224 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX4O60224 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX4O60224 AC245407.2-201ENST00000614199 451 ntBASIC6.16□□□□□ -1.42
SSX4O60224 AC107308.1-201ENST00000615897 301 ntBASIC6.16□□□□□ -1.42
SSX4O60224 HTR1DP1-201ENST00000616500 888 ntBASIC6.16□□□□□ -1.42
SSX4O60224 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.16□□□□□ -1.42
SSX4O60224 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX4O60224 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SSX4O60224 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SSX4O60224 AL161901.1-201ENST00000624954 3425 ntBASIC6.16□□□□□ -1.42
SSX4O60224 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX4O60224 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.15□□□□□ -1.42
SSX4O60224 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
SSX4O60224 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.15□□□□□ -1.42
SSX4O60224 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SSX4O60224 MTCO1P8-201ENST00000416914 1523 ntBASIC6.15□□□□□ -1.42
SSX4O60224 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSX4O60224 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SSX4O60224 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.15□□□□□ -1.42
SSX4O60224 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.15□□□□□ -1.42
SSX4O60224 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SSX4O60224 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.15□□□□□ -1.42
SSX4O60224 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SSX4O60224 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SSX4O60224 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SSX4O60224 SNORA70.5-201ENST00000365519 135 ntBASIC6.15□□□□□ -1.42
SSX4O60224 MIR187-201ENST00000385062 109 ntBASIC6.15□□□□□ -1.42
SSX4O60224 RNU6-316P-201ENST00000391027 107 ntBASIC6.15□□□□□ -1.42
SSX4O60224 EEF1GP6-201ENST00000402309 905 ntBASIC6.15□□□□□ -1.42
SSX4O60224 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SSX4O60224 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.15□□□□□ -1.42
SSX4O60224 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms