Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 GOT2P2-201ENST00000450663 1251 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 PSMA6P2-201ENST00000457574 686 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 RN7SL705P-201ENST00000481678 294 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC026826.1-201ENST00000493002 361 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC034244.2-201ENST00000514668 858 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 NXPE2P1-201ENST00000543705 726 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 MIR378C-201ENST00000578683 81 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 RN7SL32P-201ENST00000580514 281 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 BNIP3P38-201ENST00000601117 544 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 DIMT1P1-201ENST00000603970 763 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AL049777.1-201ENST00000622740 518 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 SSXP3-201ENST00000442971 1300 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AL021877.2-201ENST00000624442 10684 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 RN7SKP91-201ENST00000410852 288 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 ZNF92P1Y-201ENST00000415010 1191 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 E2F6P1-201ENST00000428850 745 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 NMNAT1P3-201ENST00000457517 888 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 RN7SL390P-201ENST00000470634 284 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 RPS4XP17-201ENST00000479057 754 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC111000.5-201ENST00000506559 1178 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC119751.5-201ENST00000514077 770 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 MTCYBP44-201ENST00000514835 823 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC135279.1-201ENST00000543493 504 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC013470.4-201ENST00000619978 986 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 MTND2P41-201ENST00000637599 773 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 AC034111.1-201ENST00000562143 3770 ntBASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP1Q96SZ6 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 TRIM53CP-201ENST00000531490 1354 ntBASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 AC104837.1-201ENST00000444644 1587 ntBASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP1Q96SZ6 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms