Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 RN7SL834P-201ENST00000461450 286 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 AC004815.1-201ENST00000484185 331 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 AC139795.3-201ENST00000606358 541 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 AC078880.4-201ENST00000617627 1749 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 ARHGAP42P4-201ENST00000549782 2934 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 OR7E101P-201ENST00000400428 513 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 AL109941.1-201ENST00000401925 229 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 CDK7P1-201ENST00000434574 693 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC114755.4-201ENST00000439114 443 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC005244.1-201ENST00000582566 339 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC004808.2-201ENST00000627965 773 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 CR383656.5-201ENST00000547616 1340 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 OR13C1P-202ENST00000641378 2919 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 RNA5SP394-201ENST00000364216 119 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 IGLV3-30-201ENST00000524362 298 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 TTLL7-201ENST00000260505 7976 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 LINC02019-201ENST00000608605 2060 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 HERC2P9-206ENST00000529624 5187 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 RNU1-19P-201ENST00000363306 165 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC245060.4-201ENST00000413293 1121 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 AL022331.1-201ENST00000429025 477 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 HAUS8P1-201ENST00000549005 542 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 AL157899.1-201ENST00000604110 936 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 AC130456.6-201ENST00000623745 765 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 TMEM51-AS1-201ENST00000310916 7100 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 MTCO1P25-201ENST00000414449 1799 ntBASIC5.12□□□□□ -1.59
VPS13CQ709C8 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS13CQ709C8 NRXN3-217ENST00000634499 6069 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VPS13CQ709C8 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 SELENOWP1-201ENST00000322792 252 ntBASIC5.11□□□□□ -1.59
VPS13CQ709C8 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 AC006455.6-201ENST00000426192 893 ntBASIC5.11□□□□□ -1.59
VPS13CQ709C8 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 CFL1P1-202ENST00000432948 411 ntBASIC5.11□□□□□ -1.59
VPS13CQ709C8 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 IGLV3-6-201ENST00000523937 250 ntBASIC5.11□□□□□ -1.59
VPS13CQ709C8 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms