Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 RNA5SP429-201ENST00000363688 109 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 MIR138-2-201ENST00000384916 84 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AL139100.1-201ENST00000408001 498 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 RN7SKP296-201ENST00000411185 341 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 RPLP1P10-201ENST00000413972 339 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 RPL23AP64-201ENST00000469465 435 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC083906.1-201ENST00000509298 406 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC134698.1-201ENST00000511619 643 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC073581.1-201ENST00000519036 575 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AP004607.6-201ENST00000525033 1202 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 PPIAP14-201ENST00000577627 496 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 RN7SL270P-201ENST00000579643 281 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC018692.2-201ENST00000624130 348 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.59□□□□□ -1.36
ZNF549Q6P9A3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
ZNF549Q6P9A3 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
ZNF549Q6P9A3 HSPD1P1-201ENST00000503199 1726 ntBASIC6.59□□□□□ -1.36
ZNF549Q6P9A3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
ZNF549Q6P9A3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AL022323.4-201ENST00000623980 13120 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 PSMC1P6-201ENST00000477233 1319 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AC092701.1-201ENST00000623627 1551 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AL049697.3-201ENST00000406493 982 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 SETP22-201ENST00000412243 957 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AC000089.1-201ENST00000424559 801 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AL139415.1-201ENST00000424862 352 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AL845321.1-201ENST00000444603 348 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AL133480.2-201ENST00000456723 487 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AC092824.1-201ENST00000483524 576 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AP005902.2-201ENST00000518393 307 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 OR52K3P-201ENST00000531655 943 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AL109628.1-201ENST00000556877 366 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AC100832.2-201ENST00000582080 776 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AC144521.1-201ENST00000607148 956 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AL137000.1-201ENST00000610528 1244 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 MIR8082-201ENST00000612488 81 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 AP000720.1-201ENST00000625091 483 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms