Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC084337.1-201ENST00000524809 686 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 OR4A6P-201ENST00000534364 970 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.58□□□□□ -1.36
NR1H2P55055 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.58□□□□□ -1.36
NR1H2P55055 CUX2P1-201ENST00000606426 298 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NR1H2P55055 AC027506.1-201ENST00000621395 198 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 AC104820.1-201ENST00000624183 307 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.58□□□□□ -1.36
NR1H2P55055 FKBP1AP4-201ENST00000631775 336 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 AL121949.2-201ENST00000403446 1548 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NR1H2P55055 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.58□□□□□ -1.36
NR1H2P55055 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NR1H2P55055 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NR1H2P55055 WASF5P-205ENST00000428639 1455 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 AC067942.1-201ENST00000488045 1493 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.58□□□□□ -1.36
NR1H2P55055 AC079949.2-201ENST00000617117 2933 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 TNPO1P2-201ENST00000426249 2665 ntBASIC6.58□□□□□ -1.36
NR1H2P55055 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NR1H2P55055 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NR1H2P55055 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NR1H2P55055 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
NR1H2P55055 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NR1H2P55055 AC025809.2-201ENST00000625085 1802 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 MAPK10-261ENST00000641050 3109 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 AC005225.5-201ENST00000623547 2225 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 DDX43P1-201ENST00000510713 1763 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NR1H2P55055 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.57□□□□□ -1.36
NR1H2P55055 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.57□□□□□ -1.36
NR1H2P55055 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 AC010168.2-201ENST00000562691 5428 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.57□□□□□ -1.36
NR1H2P55055 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
NR1H2P55055 SNORA73B-201ENST00000363217 204 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 PTMAP8-201ENST00000397729 342 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.57□□□□□ -1.36
NR1H2P55055 RN7SKP271-201ENST00000410528 320 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 RNA5SP251-201ENST00000410614 137 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 AL161742.1-201ENST00000418154 584 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 NDUFA5P8-201ENST00000449019 346 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 RN7SL160P-201ENST00000468558 284 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 AC128716.1-201ENST00000475129 166 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 AL928654.1-201ENST00000476081 354 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 RPS10P28-201ENST00000480396 498 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 RPL7AP30-201ENST00000482859 796 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.57□□□□□ -1.36
NR1H2P55055 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.57□□□□□ -1.36
NR1H2P55055 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 OR7E96P-201ENST00000530816 976 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC6.57□□□□□ -1.36
NR1H2P55055 AC087257.2-201ENST00000538759 928 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
NR1H2P55055 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.57□□□□□ -1.36
NR1H2P55055 AC023827.2-201ENST00000566880 1061 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.57□□□□□ -1.36
NR1H2P55055 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.57□□□□□ -1.36
NR1H2P55055 AC015801.1-201ENST00000585651 153 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.57□□□□□ -1.36
NR1H2P55055 FAM60CP-201ENST00000591086 664 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.57□□□□□ -1.36
NR1H2P55055 AC022001.1-201ENST00000605193 268 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.57□□□□□ -1.36
NR1H2P55055 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.57□□□□□ -1.36
NR1H2P55055 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.57□□□□□ -1.36
NR1H2P55055 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
NR1H2P55055 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.57□□□□□ -1.36
NR1H2P55055 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NR1H2P55055 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.56□□□□□ -1.36
NR1H2P55055 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 AC087045.3-201ENST00000623046 2468 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 NEK2P4-201ENST00000425793 1329 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 AL512310.3-201ENST00000547023 1335 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 IMMTP1-201ENST00000435590 2219 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NR1H2P55055 RNA5SP260-201ENST00000363849 111 ntBASIC6.56□□□□□ -1.36
NR1H2P55055 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NR1H2P55055 AP003170.5-201ENST00000397185 335 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms