Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.04□□□□□ -1.28
LHX1P48742 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.04□□□□□ -1.28
LHX1P48742 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 CTAGE11P-201ENST00000451540 2353 ntBASIC7.04□□□□□ -1.28
LHX1P48742 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
LHX1P48742 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.04□□□□□ -1.28
LHX1P48742 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
LHX1P48742 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 AC083806.2-201ENST00000617795 2685 ntBASIC7.04□□□□□ -1.28
LHX1P48742 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.03□□□□□ -1.28
LHX1P48742 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.03□□□□□ -1.28
LHX1P48742 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.03□□□□□ -1.28
LHX1P48742 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.03□□□□□ -1.28
LHX1P48742 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
LHX1P48742 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
LHX1P48742 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
LHX1P48742 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
LHX1P48742 AC121334.1-201ENST00000396414 802 ntBASIC7.03□□□□□ -1.28
LHX1P48742 MRPS21P5-201ENST00000417885 231 ntBASIC7.03□□□□□ -1.28
LHX1P48742 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.03□□□□□ -1.28
LHX1P48742 AC096632.2-201ENST00000438139 1239 ntBASIC7.03□□□□□ -1.28
LHX1P48742 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.03□□□□□ -1.28
LHX1P48742 AL020997.1-201ENST00000446554 349 ntBASIC7.03□□□□□ -1.28
LHX1P48742 BZW1P1-201ENST00000454901 1240 ntBASIC7.03□□□□□ -1.28
LHX1P48742 YRDCP3-201ENST00000456507 480 ntBASIC7.03□□□□□ -1.28
LHX1P48742 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.03□□□□□ -1.28
LHX1P48742 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
LHX1P48742 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
LHX1P48742 AC106800.2-201ENST00000514009 1103 ntBASIC7.03□□□□□ -1.28
LHX1P48742 SCARNA5-201ENST00000516201 276 ntBASIC7.03□□□□□ -1.28
LHX1P48742 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.03□□□□□ -1.28
LHX1P48742 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.03□□□□□ -1.28
LHX1P48742 AC008429.2-201ENST00000523057 864 ntBASIC7.03□□□□□ -1.28
LHX1P48742 TDGP1-201ENST00000543961 1229 ntBASIC7.03□□□□□ -1.28
LHX1P48742 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.03□□□□□ -1.28
LHX1P48742 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.03□□□□□ -1.28
LHX1P48742 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 AC025283.1-201ENST00000572039 734 ntBASIC7.03□□□□□ -1.28
LHX1P48742 RN7SL208P-201ENST00000577964 296 ntBASIC7.03□□□□□ -1.28
LHX1P48742 AC138207.8-204ENST00000579588 527 ntBASIC7.03□□□□□ -1.28
LHX1P48742 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.03□□□□□ -1.28
LHX1P48742 AL589743.6-201ENST00000611025 117 ntBASIC7.03□□□□□ -1.28
LHX1P48742 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.03□□□□□ -1.28
LHX1P48742 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 U1.41-201ENST00000617626 165 ntBASIC7.03□□□□□ -1.28
LHX1P48742 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.03□□□□□ -1.28
LHX1P48742 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.03□□□□□ -1.28
LHX1P48742 AC073488.9-201ENST00000631601 754 ntBASIC7.03□□□□□ -1.28
LHX1P48742 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
LHX1P48742 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.03□□□□□ -1.28
LHX1P48742 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX1P48742 AC087392.3-202ENST00000358446 1754 ntBASIC7.03□□□□□ -1.28
LHX1P48742 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
LHX1P48742 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.02□□□□□ -1.28
LHX1P48742 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
LHX1P48742 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
LHX1P48742 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
LHX1P48742 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.02□□□□□ -1.29
LHX1P48742 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX1P48742 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.02□□□□□ -1.29
LHX1P48742 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
LHX1P48742 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX1P48742 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX1P48742 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.02□□□□□ -1.29
LHX1P48742 SNORA64.3-201ENST00000365647 134 ntBASIC7.02□□□□□ -1.29
LHX1P48742 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.02□□□□□ -1.29
LHX1P48742 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
LHX1P48742 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX1P48742 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.02□□□□□ -1.29
LHX1P48742 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.02□□□□□ -1.29
LHX1P48742 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.02□□□□□ -1.29
LHX1P48742 BMP6P1-201ENST00000431230 679 ntBASIC7.02□□□□□ -1.29
LHX1P48742 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.02□□□□□ -1.29
LHX1P48742 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.02□□□□□ -1.29
LHX1P48742 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.02□□□□□ -1.29
LHX1P48742 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LHX1P48742 RBMY3AP-201ENST00000449381 1145 ntBASIC7.02□□□□□ -1.29
LHX1P48742 AC005165.2-201ENST00000466070 380 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms