Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 HSP90AA2P-201ENST00000530115 2196 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 OLMALINC-203ENST00000641087 3779 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 MIR99A-201ENST00000384906 81 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 AC006509.1-201ENST00000420788 634 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 AC009518.3-201ENST00000438972 253 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 AC010878.1-201ENST00000456500 1047 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 AGGF1P3-201ENST00000493675 1213 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 MTND2P31-201ENST00000512602 616 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 AC234775.3-201ENST00000564612 656 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 AC027796.1-201ENST00000575593 512 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 MIR6813-201ENST00000621638 56 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 AL118508.4-201ENST00000624142 1176 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 AC005858.3-201ENST00000624756 589 ntBASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHMP4CQ96CF2 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
CHMP4CQ96CF2 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CHMP4CQ96CF2 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CHMP4CQ96CF2 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.09
CHMP4CQ96CF2 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC8.21□□□□□ -1.09
CHMP4CQ96CF2 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.21□□□□□ -1.09
CHMP4CQ96CF2 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CHMP4CQ96CF2 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
CHMP4CQ96CF2 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CHMP4CQ96CF2 AC020658.2-201ENST00000559030 4020 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 CSNK1A1P3-201ENST00000504105 330 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 MRPS5P3-201ENST00000515577 166 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC131935.1-201ENST00000524621 333 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 OR5M6P-201ENST00000530227 937 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 MIR3908-201ENST00000579798 126 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 MIR4312-201ENST00000579909 76 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC138473.1-201ENST00000605717 526 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC091768.1-201ENST00000609258 930 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 MIR6849-201ENST00000618543 69 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC027559.1-201ENST00000636288 271 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AC011471.4-201ENST00000638271 216 ntBASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHMP4CQ96CF2 AP002833.3-201ENST00000625075 2265 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC004023.1-201ENST00000561473 1744 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 AC009220.2-201ENST00000489759 1751 ntBASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CHMP4CQ96CF2 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms