Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC007159.1-201ENST00000566529 4706 ntBASIC6.69□□□□□ -1.34
CDH3P22223 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CDH3P22223 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.69□□□□□ -1.34
CDH3P22223 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH3P22223 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 OR10D1P-201ENST00000355343 936 ntBASIC6.69□□□□□ -1.34
CDH3P22223 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 RN7SKP118-201ENST00000364331 330 ntBASIC6.69□□□□□ -1.34
CDH3P22223 LDHAP5-201ENST00000394996 622 ntBASIC6.69□□□□□ -1.34
CDH3P22223 RPLP1P10-201ENST00000413972 339 ntBASIC6.69□□□□□ -1.34
CDH3P22223 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
CDH3P22223 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH3P22223 PMS2P9-201ENST00000441237 515 ntBASIC6.69□□□□□ -1.34
CDH3P22223 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.69□□□□□ -1.34
CDH3P22223 PPP1R2P6-201ENST00000478565 588 ntBASIC6.69□□□□□ -1.34
CDH3P22223 AP005902.2-201ENST00000518393 307 ntBASIC6.69□□□□□ -1.34
CDH3P22223 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH3P22223 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH3P22223 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH3P22223 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH3P22223 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.69□□□□□ -1.34
CDH3P22223 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH3P22223 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH3P22223 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH3P22223 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH3P22223 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH3P22223 U91328.4-201ENST00000608919 517 ntBASIC6.69□□□□□ -1.34
CDH3P22223 AC073857.1-201ENST00000625082 1054 ntBASIC6.69□□□□□ -1.34
CDH3P22223 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.69□□□□□ -1.34
CDH3P22223 AL596275.2-203ENST00000641951 371 ntBASIC6.69□□□□□ -1.34
CDH3P22223 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH3P22223 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 AL662795.2-201ENST00000624252 3706 ntBASIC6.69□□□□□ -1.34
CDH3P22223 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH3P22223 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH3P22223 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH3P22223 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CDH3P22223 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 AC129502.1-201ENST00000623261 1654 ntBASIC6.68□□□□□ -1.34
CDH3P22223 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 AC110597.1-201ENST00000562669 3176 ntBASIC6.68□□□□□ -1.34
CDH3P22223 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 AL391261.1-201ENST00000555712 1479 ntBASIC6.68□□□□□ -1.34
CDH3P22223 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 RN7SKP189-201ENST00000365042 330 ntBASIC6.68□□□□□ -1.34
CDH3P22223 RN7SKP62-201ENST00000384539 329 ntBASIC6.68□□□□□ -1.34
CDH3P22223 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 RPL7P58-201ENST00000402913 758 ntBASIC6.68□□□□□ -1.34
CDH3P22223 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.68□□□□□ -1.34
CDH3P22223 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.68□□□□□ -1.34
CDH3P22223 RPL18AP14-201ENST00000417685 526 ntBASIC6.68□□□□□ -1.34
CDH3P22223 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.68□□□□□ -1.34
CDH3P22223 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.68□□□□□ -1.34
CDH3P22223 SUMO2P8-201ENST00000434672 286 ntBASIC6.68□□□□□ -1.34
CDH3P22223 PSMD8P1-201ENST00000436275 769 ntBASIC6.68□□□□□ -1.34
CDH3P22223 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.68□□□□□ -1.34
CDH3P22223 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.68□□□□□ -1.34
CDH3P22223 AL451063.1-201ENST00000450164 1133 ntBASIC6.68□□□□□ -1.34
CDH3P22223 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 PSMA6P2-201ENST00000457574 686 ntBASIC6.68□□□□□ -1.34
CDH3P22223 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.68□□□□□ -1.34
CDH3P22223 RN7SL390P-201ENST00000470634 284 ntBASIC6.68□□□□□ -1.34
CDH3P22223 RPL23AP80-201ENST00000495605 424 ntBASIC6.68□□□□□ -1.34
CDH3P22223 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.68□□□□□ -1.34
CDH3P22223 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.68□□□□□ -1.34
CDH3P22223 GTF2IP11-201ENST00000526931 420 ntBASIC6.68□□□□□ -1.34
CDH3P22223 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.68□□□□□ -1.34
CDH3P22223 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 AC183089.2-201ENST00000637931 916 ntBASIC6.68□□□□□ -1.34
CDH3P22223 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH3P22223 CDY5P-201ENST00000411487 1580 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms