Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CXCL1P09341 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CXCL1P09341 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CXCL1P09341 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CXCL1P09341 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.07□□□□□ -1.6
CXCL1P09341 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL1P09341 AC138907.8-201ENST00000623981 2256 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL1P09341 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CXCL1P09341 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 RNA5SP448-201ENST00000363151 111 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 RNA5SP483-201ENST00000363431 118 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CXCL1P09341 OR2T4-202ENST00000366475 1047 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 SLC25A5P7-201ENST00000406156 896 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 RN7SKP89-201ENST00000410774 242 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 VN1R33P-201ENST00000411800 887 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL1P09341 AL354766.1-201ENST00000423396 542 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL1P09341 RPL12P16-201ENST00000431098 498 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.07□□□□□ -1.6
CXCL1P09341 FDPSP8-201ENST00000438304 1089 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 AL390879.1-201ENST00000439143 386 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 AC002553.1-201ENST00000442828 802 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 ARMC8P1-201ENST00000443069 1289 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC5.07□□□□□ -1.6
CXCL1P09341 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL1P09341 AC093799.1-201ENST00000452411 499 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 SCDP1-201ENST00000455244 1081 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 AL445687.2-201ENST00000458156 728 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
CXCL1P09341 PABPC1P10-201ENST00000464731 381 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL1P09341 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.07□□□□□ -1.6
CXCL1P09341 AC022730.1-201ENST00000473114 568 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 RN7SL152P-201ENST00000484176 298 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 AC107956.2-201ENST00000496042 454 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL1P09341 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL1P09341 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL1P09341 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL1P09341 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL1P09341 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
CXCL1P09341 OR4H6P-201ENST00000563771 921 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CXCL1P09341 AC133569.1-201ENST00000564327 373 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL1P09341 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL1P09341 AP000436.1-201ENST00000605239 800 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL1P09341 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL1P09341 AC135068.11-201ENST00000636378 921 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CXCL1P09341 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL1P09341 UGT2B24P-201ENST00000514441 1597 ntBASIC5.07□□□□□ -1.6
CXCL1P09341 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CXCL1P09341 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.07□□□□□ -1.6
CXCL1P09341 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL1P09341 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CXCL1P09341 ADAM24P-201ENST00000398655 2101 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CXCL1P09341 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 SLC9B1P3-201ENST00000452667 1334 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 AC074141.1-201ENST00000588129 2995 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CXCL1P09341 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
CXCL1P09341 ARMCX7P-201ENST00000372828 562 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CXCL1P09341 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CXCL1P09341 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.06□□□□□ -1.6
CXCL1P09341 OR5P4P-201ENST00000424698 917 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 AC130472.1-201ENST00000427885 309 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.06□□□□□ -1.6
CXCL1P09341 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.06□□□□□ -1.6
CXCL1P09341 KATNBL1P2-201ENST00000433311 835 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 AC000362.1-201ENST00000433725 425 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 BSNDP4-201ENST00000436076 388 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 AL161626.1-201ENST00000441480 490 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.06□□□□□ -1.6
CXCL1P09341 OR7E102P-201ENST00000448855 1015 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC5.06□□□□□ -1.6
CXCL1P09341 TCEAL4P1-201ENST00000453620 588 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 AC090602.1-201ENST00000469695 252 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms